Parental gene: | HSPH1, ENSCHOG00000013998 |
| Aliases: | None |
| Description: | heat shock 105kDa/110kDa protein 1 [Source:HGNC Symbol;Acc:16969] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | scaffold_2153:12654..34054(+) |
>ENSCHOG00000013998
TCAGTCATATCATTTGGATCAAAAAACAGAACAATTGGAGTTGCAGCAAAAAATCAGCAAATCACTCATGCAAACAACAC
AGTATCTAACTTCAAGAGATTTCATGGCCGAGCATTCAGTGACCCCTTCATTCAAAAAGAGAAGGAAAACTTAAGCTACG
ATTTGGTTCCGATGAAAAATGGTGGAGTTGGAATAAAGGTAATGTACATGGATGAAGAACATCTGTTTAGTGTGGAACAG
ATAACAGCCATGTTGTTGACTAAGTTAAAGGAAACTGCTGAAAACAACCTCAAGAAGCCAGTGACAGATTGTGTTATTTC
AGTGCCCTCCTTCTTCACGGATGCGGAGAGGCGATCTGTGTTGGATGCTGCACAGATTGTTGGCCTAAACTGCTTGAGAC
TTATGAATGACATGACTGCTGTTGCTTTGAATTATGGAATTTATAAGCAGGATCTCCCCGGCCTGGATGAGAAACCTCGG
ATAGTGGTTTTTGTTGATATGGGACATTCAGCTTTTCAAGTGTCTGCCTGTGCCTTTAACAAGGGAAAATTGAAGGTATT
GGGAACTGCTTTTGATCCTTTCTTGGGAGGAAAGAACTTTGATGAAAAGTTAGTGGAACATTTTTGTGCAGAATTTAAGA
CCAAGTACAAGTTGGATGCAAAATCCAAAATTCGAGCACTCCTTCGTCTGTATCAGGAGTGTGAAAAGTTGAAAAAGCTA
ATGAGCTCGAACAGCACAGACCTGCCATTGAATATCGAGTGCTTTATGAATGACAAAGATGTTTCGGGAAAGATGAACAG
GTCACAATTTGAAGAACTCTGTGCTGACCTGCTGCAAAAAATAGAAATACCCCTTTATTCGCTGATGGAACAAACTCGAC
TAAAAGTAGAAGATGTGAGTGCTGTTGAGATCGTTGGAGGCACTACACGAATTCCAGCTGTGAAAGAAAGAATTGCCAAG
TTCTTCGGAAAAGACATCAGCACAACCCTTAATGCAGATGAAGCCGTAGCCAGAGGATGTGCGCTGCAGTGTGCAGCTCT
TTCCCCGGCTTTTAAAGTTAGGGAGTTTTCTGTCACAGATGCAATTCCTTTTCCGATATCGCTGATCTGGAATCACGATT
CAGAAGATACTGAAGGTGTTCATGAAGTGTTCAGCCGCAACCATGCTGCACCTTTCTCCAAAGTTCTCACCTTCTACAGA
AGGGGGCCTTTTGAGCTAGAAGCTTTCTATTCTGATCCTCAAGGAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTCAT
AGTTCAGAATGTTTCTGCCCAGAAAGATGGAGAAAAATCTAAGGTGAAAGTTAAAGTGCGGGTCAACACCCATGGCATTT
TCACCATCTCTACAGCATCTATGGTGGAGAAGATCCCAACTGAGGAAAATGAAGGGTCATCTCTTGAAGCAGACATGGAG
TGTGCTAATCAGAGACCACCAGAAAACCCCGACAGTGATAAAAATATCCAGCAAGACAACAGTGAAGCTGGAACACAGCC
CCAGGTACAAACTGATGCTCAACAAACCTCACAGTCTCCCCCTTCATCTGAACTTACCTCAGAAGAAAACAAAATCCCAG
ATGCTGACAAAGCCAATGAAAAGAAGGTTGACCAGCCTCCAGAAGCTAAAAAACCCAAAATAAAGGTGGTGAACGTTGAG
CTGCCTATTGAAGCCAACTTGGTCTGGCAGTTAGGGAAAGACCTTCTTAACATGTATATTGAGACAGAGGGTAAGATGAT
AATGCAGGATAAATTGGAAAAGGAAAGAAATGACGCTAAAAATGCGGTGGAAGAGTATGTGTATGAGTTCAGGGACAAGC
TCTGTGGACCATATGAAAAATTCATAAGTGAACAGGATCATCAGCATTTCCTGAGGCTCCTCACAGAGACTGAAGACTGG
CTCTATGAAGAAGGAGAGGACCAAGCCAAACAGGCATATGTTGACAAGCTGGAAGAGTTAACGAAAATTGGCACTCCAAT
TAAAATCCGGTTTCAAGAGGCTGAGGACCGGCCAAAACTGTTTGAAGAGCTGGGGCAGAGGCTCCAGCACTACGCCAAGA
TAGCAGCTGACTTCAGAAACCAGGATGAGAAGTATAACCATATCGATGAGTCTGAAATGAAGAAGGTTGAGAAGTCTGTC
AATGAAGTGATGGAGTGGATGAACAACATCATAAATGTGCAGGCTAAAAGGAGCCTGGAGCAGGACCCTGTTGTCCAAGC
ACAGGAAATTAAAGCAAAATTGAAGGAATTGAACAACACTTGTGAACCAATTGTAACACAACCCAAGCCAAAAATCGAGT
CACCCAAACTGGAGAGAACTCCAAATGGCCCAAATGTTGATAAGAAGGAAGAAGATTTAGAAGGCAAGAATGATTTTGGT
GCTGAGCCGCCACATCAGAATGGTGACTGCTACCCAAACGAGAAGAACTCCGCCCACATGGACTTGGACTAG
TCAGTCATATCATTTGGATCAAAAAACAGAACAATTGGAGTTGCAGCAAAAAATCAGCAAATCACTCATGCAAACAACAC
AGTATCTAACTTCAAGAGATTTCATGGCCGAGCATTCAGTGACCCCTTCATTCAAAAAGAGAAGGAAAACTTAAGCTACG
ATTTGGTTCCGATGAAAAATGGTGGAGTTGGAATAAAGGTAATGTACATGGATGAAGAACATCTGTTTAGTGTGGAACAG
ATAACAGCCATGTTGTTGACTAAGTTAAAGGAAACTGCTGAAAACAACCTCAAGAAGCCAGTGACAGATTGTGTTATTTC
AGTGCCCTCCTTCTTCACGGATGCGGAGAGGCGATCTGTGTTGGATGCTGCACAGATTGTTGGCCTAAACTGCTTGAGAC
TTATGAATGACATGACTGCTGTTGCTTTGAATTATGGAATTTATAAGCAGGATCTCCCCGGCCTGGATGAGAAACCTCGG
ATAGTGGTTTTTGTTGATATGGGACATTCAGCTTTTCAAGTGTCTGCCTGTGCCTTTAACAAGGGAAAATTGAAGGTATT
GGGAACTGCTTTTGATCCTTTCTTGGGAGGAAAGAACTTTGATGAAAAGTTAGTGGAACATTTTTGTGCAGAATTTAAGA
CCAAGTACAAGTTGGATGCAAAATCCAAAATTCGAGCACTCCTTCGTCTGTATCAGGAGTGTGAAAAGTTGAAAAAGCTA
ATGAGCTCGAACAGCACAGACCTGCCATTGAATATCGAGTGCTTTATGAATGACAAAGATGTTTCGGGAAAGATGAACAG
GTCACAATTTGAAGAACTCTGTGCTGACCTGCTGCAAAAAATAGAAATACCCCTTTATTCGCTGATGGAACAAACTCGAC
TAAAAGTAGAAGATGTGAGTGCTGTTGAGATCGTTGGAGGCACTACACGAATTCCAGCTGTGAAAGAAAGAATTGCCAAG
TTCTTCGGAAAAGACATCAGCACAACCCTTAATGCAGATGAAGCCGTAGCCAGAGGATGTGCGCTGCAGTGTGCAGCTCT
TTCCCCGGCTTTTAAAGTTAGGGAGTTTTCTGTCACAGATGCAATTCCTTTTCCGATATCGCTGATCTGGAATCACGATT
CAGAAGATACTGAAGGTGTTCATGAAGTGTTCAGCCGCAACCATGCTGCACCTTTCTCCAAAGTTCTCACCTTCTACAGA
AGGGGGCCTTTTGAGCTAGAAGCTTTCTATTCTGATCCTCAAGGAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTCAT
AGTTCAGAATGTTTCTGCCCAGAAAGATGGAGAAAAATCTAAGGTGAAAGTTAAAGTGCGGGTCAACACCCATGGCATTT
TCACCATCTCTACAGCATCTATGGTGGAGAAGATCCCAACTGAGGAAAATGAAGGGTCATCTCTTGAAGCAGACATGGAG
TGTGCTAATCAGAGACCACCAGAAAACCCCGACAGTGATAAAAATATCCAGCAAGACAACAGTGAAGCTGGAACACAGCC
CCAGGTACAAACTGATGCTCAACAAACCTCACAGTCTCCCCCTTCATCTGAACTTACCTCAGAAGAAAACAAAATCCCAG
ATGCTGACAAAGCCAATGAAAAGAAGGTTGACCAGCCTCCAGAAGCTAAAAAACCCAAAATAAAGGTGGTGAACGTTGAG
CTGCCTATTGAAGCCAACTTGGTCTGGCAGTTAGGGAAAGACCTTCTTAACATGTATATTGAGACAGAGGGTAAGATGAT
AATGCAGGATAAATTGGAAAAGGAAAGAAATGACGCTAAAAATGCGGTGGAAGAGTATGTGTATGAGTTCAGGGACAAGC
TCTGTGGACCATATGAAAAATTCATAAGTGAACAGGATCATCAGCATTTCCTGAGGCTCCTCACAGAGACTGAAGACTGG
CTCTATGAAGAAGGAGAGGACCAAGCCAAACAGGCATATGTTGACAAGCTGGAAGAGTTAACGAAAATTGGCACTCCAAT
TAAAATCCGGTTTCAAGAGGCTGAGGACCGGCCAAAACTGTTTGAAGAGCTGGGGCAGAGGCTCCAGCACTACGCCAAGA
TAGCAGCTGACTTCAGAAACCAGGATGAGAAGTATAACCATATCGATGAGTCTGAAATGAAGAAGGTTGAGAAGTCTGTC
AATGAAGTGATGGAGTGGATGAACAACATCATAAATGTGCAGGCTAAAAGGAGCCTGGAGCAGGACCCTGTTGTCCAAGC
ACAGGAAATTAAAGCAAAATTGAAGGAATTGAACAACACTTGTGAACCAATTGTAACACAACCCAAGCCAAAAATCGAGT
CACCCAAACTGGAGAGAACTCCAAATGGCCCAAATGTTGATAAGAAGGAAGAAGATTTAGAAGGCAAGAATGATTTTGGT
GCTGAGCCGCCACATCAGAATGGTGACTGCTACCCAAACGAGAAGAACTCCGCCCACATGGACTTGGACTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004852 | within_species_paralog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009347 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_1873 | 97.69 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000013998 retrocopies