Parental gene: | EHD1, ENSCAFG00000014128 |
| Aliases: | None |
| Description: | EH-domain containing 1 [Source:HGNC Symbol;Acc:3242] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 18:52291760..52318082(+) |
>ENSCAFG00000014128
ATGCTCTACCCCTCGGCCTCCTCTCTCCACTACCTCGTTCCTATCTCTCCGTCTCCCGAAGCAGCAGCCAGCCCCGCGCC
CGGCAGCATGTTCAGCTGGGTCAGCAAGGATGCCCGCCGCAAGAAGGAGCCGGAGCTCTTCCAGACGGTGGCCGAGGGGC
TGCGGCAGCTGTACGCGCAGAAGCTGCTGCCGCTGGAGGAGCACTACCGCTTCCACGAGTTCCACTCGCCCGCGCTGGAG
GACGCCGACTTCGATAACAAGCCCATGGTGCTCCTCGTGGGCCAGTACAGCACGGGCAAGACCACCTTCATCCGGCACCT
GATCGAGCAGGACTTCCCGGGAATGCGCATCGGGCCCGAGCCCACCACCGACTCCTTCATCGCGGTCATGCACGGCCCCA
CCGAGGGTGTGGTGCCGGGCAACGCGCTCGTCGTCGACCCGCGGCGCCCCTTCCGCAAGCTCAACGCCTTCGGCAACGCC
TTCCTCAACAGGTTCATGTGTGCCCAGCTGCCCAACCCGGTCCTGGACAGCATAAGCATCATCGACACTCCTGGGATCCT
GTCCGGAGAGAAACAGCGCATCAGCAGAGGTTACGACTTCGCAGCTGTCCTGGAGTGGTTTGCTGAGCGGGTCGACCGCA
TCATCCTGCTCTTTGACGCCCACAAGCTGGACATCTCTGACGAGTTCTCCGAGGTCATCAAGGCCCTCAAGAACCATGAG
GACAAGATCCGTGTGGTGCTGAACAAAGCCGACCAGATTGAGACCCAGCAGCTGATGCGGGTCTACGGGGCTCTCATGTG
GTCCCTGGGGAAGATCATCAACACCCCCGAGGTTGTCAGAGTATACATCGGCTCCTTCTGGTCCCACCCACTCCTCATCC
CTGACAATCGCAAGCTCTTTGAGGCGGAGGAACAGGACCTCTTTAAAGACATCCAGTCTCTGCCCCGAAATGCTGCCCTC
AGGAAGCTCAATGACCTGATCAAGCGGGCACGGCTGGCCAAGGTCCACGCCTACATCATCAGCTCCCTCAAGAAGGAGAT
GCCCAATGTCTTTGGTAAAGAGAGCAAAAAGAAGGAGCTGGTGAACAACTTGGGAGAGATCTATCAGAAGATTGAGAGGG
AGCATCAGATCTCCCCCGGGGACTTCCCAAGCCTCCGCAAGATGCAGGAACTCCTGCAGACTCAGGACTTCAGCAAGTTC
CAGGCCTTGAAGCCCAAGCTGCTAGACACAGTGGATGACATGCTGGCGAATGACATTGCCCGGCTGATGGTGATGGTTCG
CCAGGAGGAGTCCTTGATGCCCTCCCAGGCTGTGAAGGGCGGTGCCTTCGACGGCACCATGAACGGGCCCTTTGGGCACG
GCTACGGCGAAGGGGGCGGGGAGGGGCTGCTCTTCTTCTCCCAGGCTGAGGTTTAG
ATGCTCTACCCCTCGGCCTCCTCTCTCCACTACCTCGTTCCTATCTCTCCGTCTCCCGAAGCAGCAGCCAGCCCCGCGCC
CGGCAGCATGTTCAGCTGGGTCAGCAAGGATGCCCGCCGCAAGAAGGAGCCGGAGCTCTTCCAGACGGTGGCCGAGGGGC
TGCGGCAGCTGTACGCGCAGAAGCTGCTGCCGCTGGAGGAGCACTACCGCTTCCACGAGTTCCACTCGCCCGCGCTGGAG
GACGCCGACTTCGATAACAAGCCCATGGTGCTCCTCGTGGGCCAGTACAGCACGGGCAAGACCACCTTCATCCGGCACCT
GATCGAGCAGGACTTCCCGGGAATGCGCATCGGGCCCGAGCCCACCACCGACTCCTTCATCGCGGTCATGCACGGCCCCA
CCGAGGGTGTGGTGCCGGGCAACGCGCTCGTCGTCGACCCGCGGCGCCCCTTCCGCAAGCTCAACGCCTTCGGCAACGCC
TTCCTCAACAGGTTCATGTGTGCCCAGCTGCCCAACCCGGTCCTGGACAGCATAAGCATCATCGACACTCCTGGGATCCT
GTCCGGAGAGAAACAGCGCATCAGCAGAGGTTACGACTTCGCAGCTGTCCTGGAGTGGTTTGCTGAGCGGGTCGACCGCA
TCATCCTGCTCTTTGACGCCCACAAGCTGGACATCTCTGACGAGTTCTCCGAGGTCATCAAGGCCCTCAAGAACCATGAG
GACAAGATCCGTGTGGTGCTGAACAAAGCCGACCAGATTGAGACCCAGCAGCTGATGCGGGTCTACGGGGCTCTCATGTG
GTCCCTGGGGAAGATCATCAACACCCCCGAGGTTGTCAGAGTATACATCGGCTCCTTCTGGTCCCACCCACTCCTCATCC
CTGACAATCGCAAGCTCTTTGAGGCGGAGGAACAGGACCTCTTTAAAGACATCCAGTCTCTGCCCCGAAATGCTGCCCTC
AGGAAGCTCAATGACCTGATCAAGCGGGCACGGCTGGCCAAGGTCCACGCCTACATCATCAGCTCCCTCAAGAAGGAGAT
GCCCAATGTCTTTGGTAAAGAGAGCAAAAAGAAGGAGCTGGTGAACAACTTGGGAGAGATCTATCAGAAGATTGAGAGGG
AGCATCAGATCTCCCCCGGGGACTTCCCAAGCCTCCGCAAGATGCAGGAACTCCTGCAGACTCAGGACTTCAGCAAGTTC
CAGGCCTTGAAGCCCAAGCTGCTAGACACAGTGGATGACATGCTGGCGAATGACATTGCCCGGCTGATGGTGATGGTTCG
CCAGGAGGAGTCCTTGATGCCCTCCCAGGCTGTGAAGGGCGGTGCCTTCGACGGCACCATGAACGGGCCCTTTGGGCACG
GCTACGGCGAAGGGGGCGGGGAGGGGCTGCTCTTCTTCTCCCAGGCTGAGGTTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 35 .25 RPM |
| SRP017611_kidney | 64 .91 RPM |
| SRP017611_liver | 29 .37 RPM |
| SRP012049_cerebellum | 68 .50 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000002660 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000005706 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1713 | 51.26 | 57.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000014128 retrocopies