Parental gene: | ZMAT5, ENSCAFG00000012343 |
| Aliases: | None |
| Description: | zinc finger, matrin-type 5 [Source:HGNC Symbol;Acc:28046] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 26:22926624..22940713(-) |
>ENSCAFG00000012343
ATGGGGAAGCATTACTTCTGTGACTACTGCAACCGCTCCTTCCAGGACAACCTCCACAACCGCAAGAAGCACCTAAATGG
GCTACAGCACCTCAAGGCCAAGAAGGTCTGGTATGACATGTTTCGAGATGCAGCTGCCATCTTGTTAGATGAACAGAACA
AGCGGCCCTGCAGGAAGTTTCTACTGACAGGACAGTGTGACTTTGGCTCCAACTGCAGATTTTCCCACATGTCAGAGAGA
GACCTGCAGGAACTGAGTATCCAGGTGGAGGAGGAGAGGCGGGCCAGGGAGTGGCCACTAGATGTTGTCGAACTCCCTGA
GGGCCATCTGGAAGACTGGTTGGAAAAGAGAGCCAAGCGGCTGAGCTCAGCTCCGAGCAGCAGGGCTGAACCCATGAGAA
GCACCATCTTCCAGTACCCCATAGGCTGGCCACCAGTCCAGGAGCTGCCTCCATCCCTGCGGGCACCCCCACCCGGGGGG
TGGCCCCTGCAGCCCAGCGTCCAGTGGGGCTGA
ATGGGGAAGCATTACTTCTGTGACTACTGCAACCGCTCCTTCCAGGACAACCTCCACAACCGCAAGAAGCACCTAAATGG
GCTACAGCACCTCAAGGCCAAGAAGGTCTGGTATGACATGTTTCGAGATGCAGCTGCCATCTTGTTAGATGAACAGAACA
AGCGGCCCTGCAGGAAGTTTCTACTGACAGGACAGTGTGACTTTGGCTCCAACTGCAGATTTTCCCACATGTCAGAGAGA
GACCTGCAGGAACTGAGTATCCAGGTGGAGGAGGAGAGGCGGGCCAGGGAGTGGCCACTAGATGTTGTCGAACTCCCTGA
GGGCCATCTGGAAGACTGGTTGGAAAAGAGAGCCAAGCGGCTGAGCTCAGCTCCGAGCAGCAGGGCTGAACCCATGAGAA
GCACCATCTTCCAGTACCCCATAGGCTGGCCACCAGTCCAGGAGCTGCCTCCATCCCTGCGGGCACCCCCACCCGGGGGG
TGGCCCCTGCAGCCCAGCGTCCAGTGGGGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 5 .16 RPM |
| SRP017611_kidney | 6 .60 RPM |
| SRP017611_liver | 0 .73 RPM |
| SRP012049_cerebellum | 5 .75 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000008059 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000020994 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000003789 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000004251 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000017398 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000013253 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1130 | 86.47 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_1424 | 72.78 | 98.82 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000012343 retrocopies