Parental gene: | ENSA, ENSCAFG00000012054 |
| Aliases: | None |
| Description: | endosulfine alpha [Source:HGNC Symbol;Acc:3360] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 17:59801578..59808044(-) |
>ENSCAFG00000012054
ATGTCCCAGAAACAAGAAGAGGAGAACCCTGCGGAGGAGACCGGCGAGGAGAAGCAGGACACACAGGAGAAAGAAGGTAT
TCTCCCTGAGAGAGCCGAGGAGGCAAAGCTAAAGGCCAAATATCCAAGCCTAGGACAAAAGCCTGGAGGCTCCGACTTCC
TCATGAAGAGACTCCAGAAAGGGCAAAAGTACTTTGACTCAGGAGACTACAACATGGCCAAAGCCAAGATGAAGAATAAG
CAGCTGCCAAGTGCAGGACCAGACAAGAACCTGGTGACTGGTGACCACATCCCCACCCCACAGGATCTGCCCCAGAGAAA
GTCCTCGCTCGTCACCAGCAAGCTTGCGGGTGGCCAAGTTGAATGA
ATGTCCCAGAAACAAGAAGAGGAGAACCCTGCGGAGGAGACCGGCGAGGAGAAGCAGGACACACAGGAGAAAGAAGGTAT
TCTCCCTGAGAGAGCCGAGGAGGCAAAGCTAAAGGCCAAATATCCAAGCCTAGGACAAAAGCCTGGAGGCTCCGACTTCC
TCATGAAGAGACTCCAGAAAGGGCAAAAGTACTTTGACTCAGGAGACTACAACATGGCCAAAGCCAAGATGAAGAATAAG
CAGCTGCCAAGTGCAGGACCAGACAAGAACCTGGTGACTGGTGACCACATCCCCACCCCACAGGATCTGCCCCAGAGAAA
GTCCTCGCTCGTCACCAGCAAGCTTGCGGGTGGCCAAGTTGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 103 .13 RPM |
| SRP017611_kidney | 53 .03 RPM |
| SRP017611_liver | 12 .69 RPM |
| SRP012049_cerebellum | 66 .44 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001375 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000032515 | within_species_paralog | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000011261 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000004647 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000002625 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_507 | 78.67 | 61.16 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000012054 retrocopies