Parental gene: | ENSCAFG00000007840 |
| Aliases: | None |
| Description: | None |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 25:23865241..23928577(+) |
>ENSCAFG00000007840
CCCATGCCTAACCGAGGAGGCGATGGATTAGCTCCTGGGGATGACAGATTCAAACCTGTTGTACCATGGCCTCATGTTGA
AGGCGTAGAAGTGGACTTAGAGTCTATTAGAAGAAAAAACAAGGCGAAAAATGAACAAGAGCGACATGCTGGTGGAGATA
ACCAGAAAGACATAATGCAGAGGCAGTATCTCACATTTAAGCCTCAAACATTCACCTACCGAGATCCTGTGCTACGTCCA
GGGATCCTTGGTAACTTTGAACCCAAAGAACCTGAGCCTCACGGAGTGGTTGGTGGCCCTGGAGAGAACGCGAAGCCATT
GGTTTTGGGACCAGAATTCAAACATGCAATTCAAGCCAGCATTAAAGAGTTTGGATTTAACATGGTGGCAAGTGACATGA
TCTCACTGGACCGCAGCGTCAATGACTTACGACAAGAAGAATGCAAGTATTGGCATTATGATGAAAACCTGCTGACTTCC
AGTGTTGTCATCGTCTTCCATAACGAAGGATGGTCAACCCTCATGAGAACAGTCCACAGTGTAATTAAAAGGACTCCGAG
GAAATATTTAGCAGAAATTGTGTTAATTGATGATTTCAGTAATAAAGAACACTTAAAAGAAAAACTAGATGACTACATTA
AGCTGTGGAATGGCTTGGTGAAGGTATTTCGAAATGAGAGAAGGGAAGGTCTGATTCAAGCACGAAGTATTGGTGCTCAG
AAAGCCAAACTTGGACAGGTTTTGATATACCTTGATGCCCACTGTGAGGTGGCGGTTAACTGGTATGCACCACTTGTAGC
TCCCATATCTAAGGACAGAACTACATGTACTGTGCCTCTAATAGATTACATAGATGGGAATGATTATTCCATTGAACCAC
AGCAAGGTGGGGATGAAGATGGTTTTGCCAGAGGGGCCTGGGACTGGAGTTTACTATGGAAACGTATTCCTCTAAGCTAC
AAGGAAAAGGCCAAAAGAAAACATAAAACTGAACCTTATCGGTCCCCTGCCATGGCTGGTGGATTATTTGCCATTGAACG
AGACTTCTTCTTTGAACTGGGTCTGTATGATCCAGGTCTCCAGATTTGGGGTGGTGAAAACTTTGAGATCTCATATAAGA
TATGGCAGTGTGGTGGCAAATTACTGTTTGTCCCTTGCTCTCGTGTTGGACACATCTACCGTCTTGAGGGTTGGCAAGGG
AATCCTCCACCCATTTATGTTGGGTCTTCTCCAACTCTAAAGAATTATGTTAGAGTTGTAGAGGTTTGGTGGGATGAATA
TAAAGACTACTTCTATGCTAGTCGTCCTGAATCAAAGGCATTACCATATGGAGATATATCTGAGCTGAAAAAATTTCGAG
AAGATCACAACTGCAAAAGTTTCAAATGGTTCATGGAAGAAATAGCTTATGATATAACTTCACACTACCCTCTACCTCCC
AAAAATGTCGAATGGGGAGAAATCAGAGGGCTTGAGACTGTTTACTGCATTGACAGCATGGGGAAGACAAATGGAGGCTT
TGTTGAACTAGGACCCTGCCACAGGATGGGAGGCAATCAGCTTTTTCGAATCAACGAAGCAAATCAACTCATGCAGTATG
ACCAGTGTTTAACAAAGGGGCCTGATGGATCAAAAATTATGATTACACACTGTAATCTAAATGAATTTAAGGAATGGCAG
TACTTCAAGAGTCTGCACAGATTTACTCACATTCCTTCAGGAAAGTGCTTAGATCGCTCAGATGTCCTACATCAAGTGTT
CATCTCCAATTGCGACTCCAGTAAAATGACTCAAAAGTGGGAAATGAACAACATCCATAGTGTTTAG
CCCATGCCTAACCGAGGAGGCGATGGATTAGCTCCTGGGGATGACAGATTCAAACCTGTTGTACCATGGCCTCATGTTGA
AGGCGTAGAAGTGGACTTAGAGTCTATTAGAAGAAAAAACAAGGCGAAAAATGAACAAGAGCGACATGCTGGTGGAGATA
ACCAGAAAGACATAATGCAGAGGCAGTATCTCACATTTAAGCCTCAAACATTCACCTACCGAGATCCTGTGCTACGTCCA
GGGATCCTTGGTAACTTTGAACCCAAAGAACCTGAGCCTCACGGAGTGGTTGGTGGCCCTGGAGAGAACGCGAAGCCATT
GGTTTTGGGACCAGAATTCAAACATGCAATTCAAGCCAGCATTAAAGAGTTTGGATTTAACATGGTGGCAAGTGACATGA
TCTCACTGGACCGCAGCGTCAATGACTTACGACAAGAAGAATGCAAGTATTGGCATTATGATGAAAACCTGCTGACTTCC
AGTGTTGTCATCGTCTTCCATAACGAAGGATGGTCAACCCTCATGAGAACAGTCCACAGTGTAATTAAAAGGACTCCGAG
GAAATATTTAGCAGAAATTGTGTTAATTGATGATTTCAGTAATAAAGAACACTTAAAAGAAAAACTAGATGACTACATTA
AGCTGTGGAATGGCTTGGTGAAGGTATTTCGAAATGAGAGAAGGGAAGGTCTGATTCAAGCACGAAGTATTGGTGCTCAG
AAAGCCAAACTTGGACAGGTTTTGATATACCTTGATGCCCACTGTGAGGTGGCGGTTAACTGGTATGCACCACTTGTAGC
TCCCATATCTAAGGACAGAACTACATGTACTGTGCCTCTAATAGATTACATAGATGGGAATGATTATTCCATTGAACCAC
AGCAAGGTGGGGATGAAGATGGTTTTGCCAGAGGGGCCTGGGACTGGAGTTTACTATGGAAACGTATTCCTCTAAGCTAC
AAGGAAAAGGCCAAAAGAAAACATAAAACTGAACCTTATCGGTCCCCTGCCATGGCTGGTGGATTATTTGCCATTGAACG
AGACTTCTTCTTTGAACTGGGTCTGTATGATCCAGGTCTCCAGATTTGGGGTGGTGAAAACTTTGAGATCTCATATAAGA
TATGGCAGTGTGGTGGCAAATTACTGTTTGTCCCTTGCTCTCGTGTTGGACACATCTACCGTCTTGAGGGTTGGCAAGGG
AATCCTCCACCCATTTATGTTGGGTCTTCTCCAACTCTAAAGAATTATGTTAGAGTTGTAGAGGTTTGGTGGGATGAATA
TAAAGACTACTTCTATGCTAGTCGTCCTGAATCAAAGGCATTACCATATGGAGATATATCTGAGCTGAAAAAATTTCGAG
AAGATCACAACTGCAAAAGTTTCAAATGGTTCATGGAAGAAATAGCTTATGATATAACTTCACACTACCCTCTACCTCCC
AAAAATGTCGAATGGGGAGAAATCAGAGGGCTTGAGACTGTTTACTGCATTGACAGCATGGGGAAGACAAATGGAGGCTT
TGTTGAACTAGGACCCTGCCACAGGATGGGAGGCAATCAGCTTTTTCGAATCAACGAAGCAAATCAACTCATGCAGTATG
ACCAGTGTTTAACAAAGGGGCCTGATGGATCAAAAATTATGATTACACACTGTAATCTAAATGAATTTAAGGAATGGCAG
TACTTCAAGAGTCTGCACAGATTTACTCACATTCCTTCAGGAAAGTGCTTAGATCGCTCAGATGTCCTACATCAAGTGTT
CATCTCCAATTGCGACTCCAGTAAAATGACTCAAAAGTGGGAAATGAACAACATCCATAGTGTTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 1 .19 RPM |
| SRP017611_kidney | 0 .73 RPM |
| SRP017611_liver | 0 .73 RPM |
| SRP012049_cerebellum | 2 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000002494 | other_paralog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000025055 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000012122 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_220 | 97.20 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000007840 retrocopies