Parental gene: | STAR, ENSBTAG00000033345 |
| Aliases: | None |
| Description: | Steroidogenic acute regulatory protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q28918] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 27:33016929..33024353(-) |
>ENSBTAG00000033345
ATGCTTCTCGCGACGTTTAAGCTGTGTGCCGGAAGCTCCTACAGACATGTGCGCAGCATGAAGGGGCTGCAGCAGCAGGC
TGTGCTGGCCATCGGCCAGGAGCTGAACCGGAGGGCCCTAGGGGGCCCGGCCCCAGCTGCGTGGATTAACCAGGTTCGGC
GTCGCGGCTCTCTCCTAGGTTCTCAGCTGGAAGACCCTCTCTACAGCGACCAAGAGCTGGCCTATATCCAGCAGGGAGAG
GAGGCCATGCAGAGGGCCCTGGGCATCCTCAAAGACCAGGAGGGCTGGAAGAAGGAGAGCCGGCAGGCCAATGGGGACGA
GGTGCTGAGTAAAGTGATCCCTGACGTGGGCAAGGTGTTCCGGTTGGAGGTGGTGGTGGACCAGCCCATGGAGAGGCTTT
ATGAAGAGCTTGTGGAGCGCATGGAGGCCATGGGCGAGTGGAATCCCAACGTCAAGGAGATCAAGGTCCTGCAGAAGATT
GGAAAAGACACGGTCATCACTCACGAGTTGGCTGCAGAGGTGGCAGGAAACCTTGTGGGGCCCCGAGACTTTGTGAGCGT
ACGCTGTACCAAGCGCCGGGGCTCCATGTGTGTGCTGGCTGGCATGGCCACACTCTATGAGGAGATGCCCCAGCAGAAGG
GTGTCATCAGAGCGGAGCACGGCCCCACCTGCATGGTGCTCCGCCCCTTGGCTGGAAGTCCCTCAAGGACCAAACTCACC
TGGCTGCTCAGCATTGACCTCAAGGGATGGCTGCCGAAGACCATCATCAACCAGGTCCTCTCGCAGACCCAGGTGGATTT
TGCCAATCACCTGCGCAAGCGCCTGGAGTCCTGCCCTGCTCTTGAAGCTAGGTGTTGA
ATGCTTCTCGCGACGTTTAAGCTGTGTGCCGGAAGCTCCTACAGACATGTGCGCAGCATGAAGGGGCTGCAGCAGCAGGC
TGTGCTGGCCATCGGCCAGGAGCTGAACCGGAGGGCCCTAGGGGGCCCGGCCCCAGCTGCGTGGATTAACCAGGTTCGGC
GTCGCGGCTCTCTCCTAGGTTCTCAGCTGGAAGACCCTCTCTACAGCGACCAAGAGCTGGCCTATATCCAGCAGGGAGAG
GAGGCCATGCAGAGGGCCCTGGGCATCCTCAAAGACCAGGAGGGCTGGAAGAAGGAGAGCCGGCAGGCCAATGGGGACGA
GGTGCTGAGTAAAGTGATCCCTGACGTGGGCAAGGTGTTCCGGTTGGAGGTGGTGGTGGACCAGCCCATGGAGAGGCTTT
ATGAAGAGCTTGTGGAGCGCATGGAGGCCATGGGCGAGTGGAATCCCAACGTCAAGGAGATCAAGGTCCTGCAGAAGATT
GGAAAAGACACGGTCATCACTCACGAGTTGGCTGCAGAGGTGGCAGGAAACCTTGTGGGGCCCCGAGACTTTGTGAGCGT
ACGCTGTACCAAGCGCCGGGGCTCCATGTGTGTGCTGGCTGGCATGGCCACACTCTATGAGGAGATGCCCCAGCAGAAGG
GTGTCATCAGAGCGGAGCACGGCCCCACCTGCATGGTGCTCCGCCCCTTGGCTGGAAGTCCCTCAAGGACCAAACTCACC
TGGCTGCTCAGCATTGACCTCAAGGGATGGCTGCCGAAGACCATCATCAACCAGGTCCTCTCGCAGACCCAGGTGGATTT
TGCCAATCACCTGCGCAAGCGCCTGGAGTCCTGCCCTGCTCTTGAAGCTAGGTGTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 3 .93 RPM |
| SRP017611_kidney | 2 .79 RPM |
| SRP017611_liver | 1 .21 RPM |
| ERP005899_muscle | 0 .90 RPM |
| ERP005899_liver | 4 .11 RPM |
| SRP030211_testis | 212 .42 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000038795 | within_species_paralog | 1 retrogene | |
| Homo sapiens | ENSG00000147465 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000005787 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018520 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_743 | 97.19 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_744 | 96.50 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_btau_1248 | 98.60 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000033345 retrocopies