Parental gene:

C3H1orf146, ENSBTAG00000027936

Aliases:C3H1orf146, C1orf146
Description:None
Organism:Cow (Bos taurus)
Coordinates:3:51326166..51349674(-)


>ENSBTAG00000027936
ATGGCTGAAAGTGATGGAAAAGAAAAAATAAAATGGACAACCACCATTATTATTAGCTCATCTCTTAAGAGTTATGAAGT
TGCAGCTGCCCTAGAAAATCGAAGCCACAAGGTTAGGTATTCCGATTCAGTGGAGAATGGATCAATTATATTTTCTCTTT
CTGGAGTTGCATTTTTATTGATGGATGCTAGAGAATGCTTTATGTCTGCTGAAGAAACATTTCTAGCCAAAATTGAGAAG
TTTATTAACATTCACCAAAATAGTTTTTTGGTTCTGTTTGCTGCCCTGCATGGACCTGAAGAATGGAAACTGATGTTCAG
GATTCAGCAGAGATTCCTGGGTAGTAACTTACGGATACTTCCAGTACACAACACAGTAAATGCGATTAATCTTATGTGCA
CCATAGCTAAGATCACCTCCAAATCATACATAGATAGCATCTGCTACAGAATGATAACAACTAAAGCTTACATCATTGAG
CAAAGTCCTGTGTGGAAAACACTTCAAAAGATAAAACTGAGTAGTGATACATTTAACCCAAATTAG

Library Parental gene expression (RPM)
SRP017611_brain 0 .27 RPM
SRP017611_kidney 0 .30 RPM
SRP017611_liver 0 .00 RPM
ERP005899_muscle 0 .11 RPM
ERP005899_liver 0 .14 RPM
SRP030211_testis 7 .56 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004012 ortholog_one2one 1 retrogene
retro_chof_2167,
Callithrix jacchus ENSCJAG00000017547 ortholog_one2one 1 retrogene
retro_cjac_1817,
Erinaceus europaeus ENSEEUG00000003083 ortholog_one2one 1 retrogene
retro_eeur_601,
Homo sapiens ENSG00000203910 ortholog_one2one 1 retrogene
retro_hsap_3381,
Gorilla gorilla ENSGGOG00000006653 ortholog_one2one 1 retrogene
retro_ggor_2289,
Macropus eugenii ENSMEUG00000013311 ortholog_one2one 1 retrogene
retro_meug_143,
Myotis lucifugus ENSMLUG00000016984 ortholog_one2one 1 retrogene
retro_mluc_1260,
Macaca mulatta ENSMMUG00000010094 ortholog_one2one 1 retrogene
retro_mmul_2107,
Nomascus leucogenys ENSNLEG00000010426 ortholog_one2one 1 retrogene
retro_nleu_970,
Pongo abelii ENSPPYG00000001156 ortholog_one2one 1 retrogene
retro_pabe_2780,
Pan troglodytes ENSPTRG00000030530 ortholog_one2one 1 retrogene
retro_ptro_2298,
Ictidomys tridecemlineatus ENSSTOG00000012506 ortholog_one2one 1 retrogene
retro_itri_404,
Tursiops truncatus ENSTTRG00000014426 ortholog_one2one 1 retrogene
retro_ttru_1727,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_490 95.60 100.00
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Download FASTA sequences of all ENSBTAG00000027936 retrocopies