Parental gene: | IKZF5, ENSBTAG00000023847 |
| Aliases: | None |
| Description: | Zinc finger protein Pegasus [Source:UniProtKB/Swiss-Prot;Acc:A4IFJ6] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 26:43118089..43134286(-) |
>ENSBTAG00000023847
ATGGGTGAGAAGAAACCGGAGCCTTTGGACTTTGTGAAAGATTTCCAGGAATACCTAACTCAGCAGACCCATCATGTCAA
CATGATTTCTGGATCAGTTAGTGGGGACAAAGAAGCAGAGGCTCTTCAGGGAGCTGGAACAGATGGTGATCAAAATGGAC
TTGATCACCCATCTGTTGAAGTTTCCCTGGATGAAAACTCAGGAATGTTAGTAGACGGGTTTGAAAGGACCTTTGATGGA
AAGCTCAAGTGTCGGTATTGCAACTATGCCAGCAAAGGCACCGCCCGGCTCATTGAACACATTAGAATTCACACAGGTGA
GAAACCTCATCGATGTCACTTGTGTCCATTTGCATCTGCCTATGAGCGTCATCTGGAAGCCCACATGCGTTCCCATACAG
GAGAAAAACCATACAAATGTGAATTGTGTTCCTTCCGCTGCAGTGACCGAAGCAACCTGTCCCATCATCGAAGGCGCAAG
CATAAAATGGTACCAATTAAAGGTACTAGGTCTTCCTTAAGCAGCAAGAAAATGTGGGGGGTTTTACAGAAGAAAACTAG
CAACCTGAACTATAGCAGAAGAGCACTCATCAACTTAAGCCCACCTTCCATGGTGGTTCAGAAGCCAGACTACCTTAATG
ATTTTACCCACGAAATCCCAAATATCCAGACTGACTCCTATGAAAGTATGGCGAAAACTACACCAACTGGAGGCCTGCCA
AGAGACCCCCAAGAACTCATGGTCGACAACCCTTTAAACCAGCTCTCAACTCTAGCTGGACAGCTGTCCAGTTTGCCACC
TGAAAACCAAAACCCCGCGTCCCCTGACGTAGTTCCCTGCGCCGAGGAGAAGCCCTTTATGATGCAGCAGCCCTCCGCCC
AGGCAGTGGTTTCTGCCGTGTCCGCAAGTCTTCCTCAGAGCTCCTCTCCCGCCAGCCCAGAGCCTCGGCCGCCACACGGC
CAGAGGAACTACAGTCCGGTGGCAGGGCCGAGCAGTGAGCCAAGTGCCCACACAAGTACTCCAAGCATGGGAAACAGCCA
GCCGAGCACTCCAGCTCCCACCCTGCCAGTCCAGGACCCGCAGCTTCTCCACCACTGCCAGCACTGTGACATGTACTTTG
CCGATAATATCCTTTACACTATTCACATGGGATGTCATGGGTATGAAAATCCTTTTCAGTGTAACATATGTGGGTGCAAA
TGTAAAAACAAGTATGATTTTGCCTGTCATTTTGCAAGAGGGCAACATAACCAACACTGA
ATGGGTGAGAAGAAACCGGAGCCTTTGGACTTTGTGAAAGATTTCCAGGAATACCTAACTCAGCAGACCCATCATGTCAA
CATGATTTCTGGATCAGTTAGTGGGGACAAAGAAGCAGAGGCTCTTCAGGGAGCTGGAACAGATGGTGATCAAAATGGAC
TTGATCACCCATCTGTTGAAGTTTCCCTGGATGAAAACTCAGGAATGTTAGTAGACGGGTTTGAAAGGACCTTTGATGGA
AAGCTCAAGTGTCGGTATTGCAACTATGCCAGCAAAGGCACCGCCCGGCTCATTGAACACATTAGAATTCACACAGGTGA
GAAACCTCATCGATGTCACTTGTGTCCATTTGCATCTGCCTATGAGCGTCATCTGGAAGCCCACATGCGTTCCCATACAG
GAGAAAAACCATACAAATGTGAATTGTGTTCCTTCCGCTGCAGTGACCGAAGCAACCTGTCCCATCATCGAAGGCGCAAG
CATAAAATGGTACCAATTAAAGGTACTAGGTCTTCCTTAAGCAGCAAGAAAATGTGGGGGGTTTTACAGAAGAAAACTAG
CAACCTGAACTATAGCAGAAGAGCACTCATCAACTTAAGCCCACCTTCCATGGTGGTTCAGAAGCCAGACTACCTTAATG
ATTTTACCCACGAAATCCCAAATATCCAGACTGACTCCTATGAAAGTATGGCGAAAACTACACCAACTGGAGGCCTGCCA
AGAGACCCCCAAGAACTCATGGTCGACAACCCTTTAAACCAGCTCTCAACTCTAGCTGGACAGCTGTCCAGTTTGCCACC
TGAAAACCAAAACCCCGCGTCCCCTGACGTAGTTCCCTGCGCCGAGGAGAAGCCCTTTATGATGCAGCAGCCCTCCGCCC
AGGCAGTGGTTTCTGCCGTGTCCGCAAGTCTTCCTCAGAGCTCCTCTCCCGCCAGCCCAGAGCCTCGGCCGCCACACGGC
CAGAGGAACTACAGTCCGGTGGCAGGGCCGAGCAGTGAGCCAAGTGCCCACACAAGTACTCCAAGCATGGGAAACAGCCA
GCCGAGCACTCCAGCTCCCACCCTGCCAGTCCAGGACCCGCAGCTTCTCCACCACTGCCAGCACTGTGACATGTACTTTG
CCGATAATATCCTTTACACTATTCACATGGGATGTCATGGGTATGAAAATCCTTTTCAGTGTAACATATGTGGGTGCAAA
TGTAAAAACAAGTATGATTTTGCCTGTCATTTTGCAAGAGGGCAACATAACCAACACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 13 .38 RPM |
| SRP017611_kidney | 18 .97 RPM |
| SRP017611_liver | 4 .23 RPM |
| ERP005899_muscle | 9 .87 RPM |
| ERP005899_liver | 13 .27 RPM |
| SRP030211_testis | 32 .39 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000021914 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000040167 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000013340 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1752 | 79.94 | 76.61 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000023847 retrocopies