Parental gene: | ERH, ENSBTAG00000017798 |
| Aliases: | None |
| Description: | Enhancer of rudimentary homolog [Source:UniProtKB/Swiss-Prot;Acc:Q3SZC0] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 10:81521059..81533819(-) |
>ENSBTAG00000017798
ATGTCTCACACCATCTTGCTGGTACAGCCTACCAAGAGGCCAGAAGGCAGAACTTACGCTGACTATGAATCTGTGAATGA
GTGTATGGAAGGTGTTTGTAAAATGTATGAAGAACATCTGAAGAGAATGAATCCCAACAGCCCCTCTATCACATATGATA
TCAGTCAGTTGTTTGATTTTATTGATGACCTGGCAGACCTCAGCTGCCTTGTTTACCGAGCTGATACCCAGACATACCAG
CCTTATAACAAAGATTGGATTAAAGAGAAGATCTACGTGCTCCTTCGTCGACAGGCCCAACAGGCTGGGAAATAG
ATGTCTCACACCATCTTGCTGGTACAGCCTACCAAGAGGCCAGAAGGCAGAACTTACGCTGACTATGAATCTGTGAATGA
GTGTATGGAAGGTGTTTGTAAAATGTATGAAGAACATCTGAAGAGAATGAATCCCAACAGCCCCTCTATCACATATGATA
TCAGTCAGTTGTTTGATTTTATTGATGACCTGGCAGACCTCAGCTGCCTTGTTTACCGAGCTGATACCCAGACATACCAG
CCTTATAACAAAGATTGGATTAAAGAGAAGATCTACGTGCTCCTTCGTCGACAGGCCCAACAGGCTGGGAAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 15 .94 RPM |
| SRP017611_kidney | 24 .48 RPM |
| SRP017611_liver | 15 .55 RPM |
| ERP005899_muscle | 51 .15 RPM |
| ERP005899_liver | 28 .19 RPM |
| SRP030211_testis | 75 .58 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000014940 | possible_ortholog | 2 retrogenes | |
| Equus caballus | ENSECAG00000019178 | possible_ortholog | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000007758 | ortholog_one2one | 6 retrogenes | |
| Echinops telfairi | ENSETEG00000016172 | ortholog_one2one | 5 retrogenes | |
| Homo sapiens | ENSG00000100632 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000011879 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000004636 | possible_ortholog | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000000086 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000005939 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000002307 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000013963 | ortholog_one2one | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000006444 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_438 | 98.08 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_651 | 93.27 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_btau_795 | 78.85 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_btau_1260 | 92.45 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000017798 retrocopies