Parental gene: | ERI3, ENSBTAG00000015559 |
| Aliases: | ERI3, PRNPIP |
| Description: | ERI1 exoribonuclease 3 [Source:UniProtKB/Swiss-Prot;Acc:A6QLH5] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 3:102290328..102421170(+) |
>ENSBTAG00000015559
ATGGCGACAGCCTCTCCCGCTGCTGACGGGGGGCGGGGGCGGCCCTGGGAAGGAGGGCTGGTCTCCTGGCCCCCTGCTCC
TCCGCTTACAATCCCTTGGACTTGGATGGGCCCGAGTTGGGGGCAACATCCCGGGCATTGGGGCTTTCCAGCTCTCACTG
AACCTTCAGCATCCCCAGCGGCCAGTCTTGGCATCTTCGAAGTAAGGAGAGTTTTAGATGCTTCTGGATGTTCAATGCTA
GCACCTTTACAGACTGGAGCAGCTCGATTTTCTTCATATTTGCTTTCAAGAGCAAGAAAAGTGCTGGGCTCTCACTTGTT
CTCTCCTTGTGGTGTTCCGGAGTTCTGCTCCATATCCACCAGAAAGCTGGCGGCCCACAGCTTTGGCGCATCCATGGCGG
CAATGATGTCCTTCCCTCCCCAGAGGTATCACTACTTTTTAGTGCTGGACTTTGAGGCCACGTGTGACAAGCCACAGATT
CATCCTCAGGAAATCATCGAGTTCCCCATCCTGAAGCTAAATGGCCGGACCATGGAGATTGAGTCTACCTTTCACATGTA
TGTCCAGCCCGTAGTCCATCCACAGCTTACTCCCTTCTGTACAGAGCTCACCGGGATTATTCAAGCCATGGTGGATGGTC
AGCCAAGCCTGCAGCAAGTGCTGGAGAGGGTCGATGAGTGGATGGCGAAGGAAGGCCTCTTAGATCCAAACGTCAAGTCA
ATTTTTGTCACCTGTGGAGACTGGGACTTAAAAGTCATGCTCCCAGGACAGTGCCAGTACTTGGGCTTGCCAGTAGCAGA
TTACTTCAAGCAGTGGATTAACCTGAAAAAGGCTTACAGCTTCGCCATGGGCTGCTGGCCCAAGAATGGACTTCTAGACA
TGAACAAGGGCCTCAGCCTGCAACACATAGGCCGGCCCCACAGCGGCATTGATGACTGCAAGAACATTGCCAACATCATG
AAGACACTCGCGTATCGAGGCTTTATCTTCAAGCAGACGTCAAAGCCGTTCTGA
ATGGCGACAGCCTCTCCCGCTGCTGACGGGGGGCGGGGGCGGCCCTGGGAAGGAGGGCTGGTCTCCTGGCCCCCTGCTCC
TCCGCTTACAATCCCTTGGACTTGGATGGGCCCGAGTTGGGGGCAACATCCCGGGCATTGGGGCTTTCCAGCTCTCACTG
AACCTTCAGCATCCCCAGCGGCCAGTCTTGGCATCTTCGAAGTAAGGAGAGTTTTAGATGCTTCTGGATGTTCAATGCTA
GCACCTTTACAGACTGGAGCAGCTCGATTTTCTTCATATTTGCTTTCAAGAGCAAGAAAAGTGCTGGGCTCTCACTTGTT
CTCTCCTTGTGGTGTTCCGGAGTTCTGCTCCATATCCACCAGAAAGCTGGCGGCCCACAGCTTTGGCGCATCCATGGCGG
CAATGATGTCCTTCCCTCCCCAGAGGTATCACTACTTTTTAGTGCTGGACTTTGAGGCCACGTGTGACAAGCCACAGATT
CATCCTCAGGAAATCATCGAGTTCCCCATCCTGAAGCTAAATGGCCGGACCATGGAGATTGAGTCTACCTTTCACATGTA
TGTCCAGCCCGTAGTCCATCCACAGCTTACTCCCTTCTGTACAGAGCTCACCGGGATTATTCAAGCCATGGTGGATGGTC
AGCCAAGCCTGCAGCAAGTGCTGGAGAGGGTCGATGAGTGGATGGCGAAGGAAGGCCTCTTAGATCCAAACGTCAAGTCA
ATTTTTGTCACCTGTGGAGACTGGGACTTAAAAGTCATGCTCCCAGGACAGTGCCAGTACTTGGGCTTGCCAGTAGCAGA
TTACTTCAAGCAGTGGATTAACCTGAAAAAGGCTTACAGCTTCGCCATGGGCTGCTGGCCCAAGAATGGACTTCTAGACA
TGAACAAGGGCCTCAGCCTGCAACACATAGGCCGGCCCCACAGCGGCATTGATGACTGCAAGAACATTGCCAACATCATG
AAGACACTCGCGTATCGAGGCTTTATCTTCAAGCAGACGTCAAAGCCGTTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 39 .97 RPM |
| SRP017611_kidney | 33 .61 RPM |
| SRP017611_liver | 9 .36 RPM |
| ERP005899_muscle | 22 .65 RPM |
| ERP005899_liver | 8 .58 RPM |
| SRP030211_testis | 17 .74 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000003995 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000005285 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000000655 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1015 | 86.86 | 51.93 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000015559 retrocopies