Parental gene: | BT.87811, ENSBTAG00000014741 |
| Aliases: | None |
| Description: | homeobox protein OTX2 [Source:RefSeq peptide;Acc:NP_001180130] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 10:69458817..69462865(-) |
>ENSBTAG00000014741
ATGATGTCTTATCTTAAGCAACCGCCTTATGCAGTCAATGGGCTGAGTCTGACCACTTCGGGCATGGACTTGCTGCACCC
CTCGGTGGGCTACCCGGCCACCCCTCGGAAACAGCGGCGGGAGAGGACGACATTCACCCGAGCGCAGCTAGATGTGCTGG
AAGCACTGTTTGCTAAGACCCGATACCCAGACATCTTCATGCGGGAGGAGGTGGCGCTGAAAATCAACTTGCCTGAGTCC
AGGGTACAGGTATGGTTTAAGAATCGAAGAGCTAAGTGCCGCCAACAGCAGCAGCAACAGCAGAACGGAGGTCAAAACAA
AGTGAGACCTGCCAAAAAGAAGACATCTCCTGCCCGGGAAGTGAGTTCAGAGAGTGGAACAAGTGGCCAATTCACTCCCC
CCTCTAGCACCTCAGTCCCAGCCATTTCCAGCAGCAGTGCTCCTGTGTCTATCTGGAGCCCAGCTTCCATCTCCCCACTG
TCAGATCCCCTGTCCACCTCCTCTTCCTGCATGCAGAGGTCCTATCCCATGACCTATACTCAGGCTTCAGGTTATAGTCA
AGGATATGCTGGCTCAACTTCCTACTTTGGGGGCATGGACTGTGGATCTTATTTGACCCCTATGCATCACCAGCTTCCTG
GACCAGGGACCACACTCAGTCCCATGGGTACCAATGCAGTCACCAGCCATCTCAATCAGTCCCCAGCTTCTCTTTCCACC
CAGGGATATGGAGCTTCAAGCTTGGGTTTTAACTCAACCACTGATTGCTTGGATTATAAGGACCAAACTGCCTCCTGGAA
GCTTAACTTCAATGCTGACTGCTTGGATTATAAAGATCAGACATCTTCATGGAAATTCCAGGTTTTGTGA
ATGATGTCTTATCTTAAGCAACCGCCTTATGCAGTCAATGGGCTGAGTCTGACCACTTCGGGCATGGACTTGCTGCACCC
CTCGGTGGGCTACCCGGCCACCCCTCGGAAACAGCGGCGGGAGAGGACGACATTCACCCGAGCGCAGCTAGATGTGCTGG
AAGCACTGTTTGCTAAGACCCGATACCCAGACATCTTCATGCGGGAGGAGGTGGCGCTGAAAATCAACTTGCCTGAGTCC
AGGGTACAGGTATGGTTTAAGAATCGAAGAGCTAAGTGCCGCCAACAGCAGCAGCAACAGCAGAACGGAGGTCAAAACAA
AGTGAGACCTGCCAAAAAGAAGACATCTCCTGCCCGGGAAGTGAGTTCAGAGAGTGGAACAAGTGGCCAATTCACTCCCC
CCTCTAGCACCTCAGTCCCAGCCATTTCCAGCAGCAGTGCTCCTGTGTCTATCTGGAGCCCAGCTTCCATCTCCCCACTG
TCAGATCCCCTGTCCACCTCCTCTTCCTGCATGCAGAGGTCCTATCCCATGACCTATACTCAGGCTTCAGGTTATAGTCA
AGGATATGCTGGCTCAACTTCCTACTTTGGGGGCATGGACTGTGGATCTTATTTGACCCCTATGCATCACCAGCTTCCTG
GACCAGGGACCACACTCAGTCCCATGGGTACCAATGCAGTCACCAGCCATCTCAATCAGTCCCCAGCTTCTCTTTCCACC
CAGGGATATGGAGCTTCAAGCTTGGGTTTTAACTCAACCACTGATTGCTTGGATTATAAGGACCAAACTGCCTCCTGGAA
GCTTAACTTCAATGCTGACTGCTTGGATTATAAAGATCAGACATCTTCATGGAAATTCCAGGTTTTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 3 .06 RPM |
| SRP017611_kidney | 0 .00 RPM |
| SRP017611_liver | 0 .00 RPM |
| ERP005899_muscle | 0 .00 RPM |
| ERP005899_liver | 0 .00 RPM |
| SRP030211_testis | 0 .08 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000018583 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000003420 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000005063 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000004650 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_687 | 86.60 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000014741 retrocopies