Parental gene: | BT.29579, ENSBTAG00000012525 |
| Aliases: | None |
| Description: | histo-blood group ABO system transferase [Source:RefSeq peptide;Acc:NP_001071394] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 11:104232296..104251043(-) |
>ENSBTAG00000012525
CTGCACCCGATAGATTTCTGGGGAAACCGCACCAAGTCCTGTCTGTGTCTGATCCTGCTCTTTGCCGTACTTCTGGGCTT
CTACAGCAACGTGTTCAGCCTGATCCCCAGAAGACAGACAGAAAAGTCTCAAAGCAGCCCTGAGGCCCACCACGTGCAGG
GGCGACGGGAGAGCCTGACTTTAAGTGAAGGTGACGGCCACCTGGACAGCTGCAGGATACCTGAGGTACCCAGGTTGCTT
TACCCCAAGGCTCAGCTGCTCAAGCCCTTGAGAGTGGACGTGCTGGTCATGACCCCCTGGTTTGCTCCCGTCGTCTGGGA
CGGGACCTTCGACTCTGCCCTCTTGGATGTGCAATTCAGAAACACCACCATTGGGCTGACCGTGTTCGCCATCAAAAAAT
ACGTGGTCTTCCTGCGGCTCTTCCTGGAGACGGCGGAGAAGTACTTCATGGTGGGGCACAAGGTCATCTACTACGTCTTC
ACCGACCGGCCGGCGGACGTGCCCCAGATCGCCCTCCAGGACGGGAGGCAGGTGGTGGTCCTCCACGTCGGCAACTACAG
ACGCTGGCAGGACATCTCCATGCACCGGATGGAGATGATCAGCAACTTCTCGCGGCGGCGCTTCCTCCGCGAGGTGGACT
ACCTGGTGTGCCTGTACGTGGACATGAAGTTCAGCGACCACGTGGGCGTGGAGATCCTGGCGCCGCTCTTCGGGACCCTA
CACCCTGGCTTCTACGCTGCGGACCGCCAGTCCTTCACCTATGAGCGCCGGCCCTTGTCTCGAGCCTACATCCCGAGAGA
CGAGGGTGATTTCTACTACGCGGGAGGCTTTTTTGGGGGGTCGGTCCCTGAGGTTTACCGGCTCACCACGGCCTGCCACC
AGGCCATGACGGCCGACCAGGCCCAGGGCATCGAGGCCGTGTGGCATGACGAGAGCCACCTGAACCGATACCTGCTGTCG
CACAAGCCCAGCAAGGTGCTGTCCCCCGAGTACCTGTGGGACGAGCAGATGCTGCAGAGGCCGCCGTTACTCCGGAAGCT
GCGCTACGTGGCTGTGCCCATGAACCATACAGAGATTCGGAGC
CTGCACCCGATAGATTTCTGGGGAAACCGCACCAAGTCCTGTCTGTGTCTGATCCTGCTCTTTGCCGTACTTCTGGGCTT
CTACAGCAACGTGTTCAGCCTGATCCCCAGAAGACAGACAGAAAAGTCTCAAAGCAGCCCTGAGGCCCACCACGTGCAGG
GGCGACGGGAGAGCCTGACTTTAAGTGAAGGTGACGGCCACCTGGACAGCTGCAGGATACCTGAGGTACCCAGGTTGCTT
TACCCCAAGGCTCAGCTGCTCAAGCCCTTGAGAGTGGACGTGCTGGTCATGACCCCCTGGTTTGCTCCCGTCGTCTGGGA
CGGGACCTTCGACTCTGCCCTCTTGGATGTGCAATTCAGAAACACCACCATTGGGCTGACCGTGTTCGCCATCAAAAAAT
ACGTGGTCTTCCTGCGGCTCTTCCTGGAGACGGCGGAGAAGTACTTCATGGTGGGGCACAAGGTCATCTACTACGTCTTC
ACCGACCGGCCGGCGGACGTGCCCCAGATCGCCCTCCAGGACGGGAGGCAGGTGGTGGTCCTCCACGTCGGCAACTACAG
ACGCTGGCAGGACATCTCCATGCACCGGATGGAGATGATCAGCAACTTCTCGCGGCGGCGCTTCCTCCGCGAGGTGGACT
ACCTGGTGTGCCTGTACGTGGACATGAAGTTCAGCGACCACGTGGGCGTGGAGATCCTGGCGCCGCTCTTCGGGACCCTA
CACCCTGGCTTCTACGCTGCGGACCGCCAGTCCTTCACCTATGAGCGCCGGCCCTTGTCTCGAGCCTACATCCCGAGAGA
CGAGGGTGATTTCTACTACGCGGGAGGCTTTTTTGGGGGGTCGGTCCCTGAGGTTTACCGGCTCACCACGGCCTGCCACC
AGGCCATGACGGCCGACCAGGCCCAGGGCATCGAGGCCGTGTGGCATGACGAGAGCCACCTGAACCGATACCTGCTGTCG
CACAAGCCCAGCAAGGTGCTGTCCCCCGAGTACCTGTGGGACGAGCAGATGCTGCAGAGGCCGCCGTTACTCCGGAAGCT
GCGCTACGTGGCTGTGCCCATGAACCATACAGAGATTCGGAGC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 0 .18 RPM |
| SRP017611_kidney | 29 .04 RPM |
| SRP017611_liver | 0 .68 RPM |
| ERP005899_muscle | 33 .26 RPM |
| ERP005899_liver | 0 .22 RPM |
| SRP030211_testis | 0 .51 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001005 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000010293 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000012419 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_699 | 60.23 | 72.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000012525 retrocopies