Parental gene: | BT.58955, ENSBTAG00000007817 |
| Aliases: | None |
| Description: | lys-63-specific deubiquitinase BRCC36 [Source:RefSeq peptide;Acc:NP_001069258] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | X:38709694..38788194(-) |
>ENSBTAG00000007817
ATGGCGGTGCAGGTGGTGCAGGCGGTGCAAGCGGTCCATCTGGAGTCAGACGCCTTCCTGGTGTGTCTCAATCACGCTCT
GAGCACGGAGAAGGAAGAGGTGATGGGGCTGTGCATTGGGGAGTTAAATGATGACTTAAGGAATGACCCCAAATTTACAT
ATACTGGAACTGAAATGCGCACAGTTGCTGAAAAGGTTGACACCGTCAGAATTGTTCACATTCATTCTGTCATCATCCTG
CGTCGTTCCGATAAGAGGAAGGATCGTGTGGAAATTTCTCCAGAGCAGCTGTCTGCGGCTTCAACAGAGACACACAGGTT
GGCTGAACTGACAGGTCGTCCCATGAGAGTTGTGGGTTGGTATCACTCCCATCCCCATATAACTGTTTGGCCTTCACATG
TTGATGTCCGCACACAAGCCATGTACCAGATGATGGATCAAGGTTTTGTAGGACTTATCTTTTCCTGCTTCATAGAAGAT
AAAAATACAAAGACTGGACGGGTACTCTATACTTGCTTTCAATCCATACAGGCCCAAAAGAGCTCAGAGTCCCCTCGTGG
TCCCCGAGACTTCTGGAGCTCCAGCCAGCACATCTCCATTGAGGGACAGAAGGAGGAGGAAAGGTATGAGAGAATTGAAA
TCCCAATTCATATTGTACCTCACGTAACCATTGGGAAAGTATGCCTTGAGTCAGCAGTTGAGCTGCCCAAGATCCTGTGC
CAAGAAGAACAAGATGCATATAGGAGGATCCACAGCCTTACACATCTGGACTCAGTAACCAAGATCCATAATGGCTCAGT
ATTTACCAAGAATCTGTGCAGTCAGATGTCAGCGGTCAGCGGACCTCTACTGCAGTGGTTGGAGGACAGACTGGAGCAAA
ACCAACAGCATGTGCAGGAGCTGCAACAAGAAAAGGAAGAGCTTCTGCAAGAACTTTCTTCTCTAGAATAA
ATGGCGGTGCAGGTGGTGCAGGCGGTGCAAGCGGTCCATCTGGAGTCAGACGCCTTCCTGGTGTGTCTCAATCACGCTCT
GAGCACGGAGAAGGAAGAGGTGATGGGGCTGTGCATTGGGGAGTTAAATGATGACTTAAGGAATGACCCCAAATTTACAT
ATACTGGAACTGAAATGCGCACAGTTGCTGAAAAGGTTGACACCGTCAGAATTGTTCACATTCATTCTGTCATCATCCTG
CGTCGTTCCGATAAGAGGAAGGATCGTGTGGAAATTTCTCCAGAGCAGCTGTCTGCGGCTTCAACAGAGACACACAGGTT
GGCTGAACTGACAGGTCGTCCCATGAGAGTTGTGGGTTGGTATCACTCCCATCCCCATATAACTGTTTGGCCTTCACATG
TTGATGTCCGCACACAAGCCATGTACCAGATGATGGATCAAGGTTTTGTAGGACTTATCTTTTCCTGCTTCATAGAAGAT
AAAAATACAAAGACTGGACGGGTACTCTATACTTGCTTTCAATCCATACAGGCCCAAAAGAGCTCAGAGTCCCCTCGTGG
TCCCCGAGACTTCTGGAGCTCCAGCCAGCACATCTCCATTGAGGGACAGAAGGAGGAGGAAAGGTATGAGAGAATTGAAA
TCCCAATTCATATTGTACCTCACGTAACCATTGGGAAAGTATGCCTTGAGTCAGCAGTTGAGCTGCCCAAGATCCTGTGC
CAAGAAGAACAAGATGCATATAGGAGGATCCACAGCCTTACACATCTGGACTCAGTAACCAAGATCCATAATGGCTCAGT
ATTTACCAAGAATCTGTGCAGTCAGATGTCAGCGGTCAGCGGACCTCTACTGCAGTGGTTGGAGGACAGACTGGAGCAAA
ACCAACAGCATGTGCAGGAGCTGCAACAAGAAAAGGAAGAGCTTCTGCAAGAACTTTCTTCTCTAGAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 11 .15 RPM |
| SRP017611_kidney | 14 .28 RPM |
| SRP017611_liver | 13 .82 RPM |
| ERP005899_muscle | 12 .19 RPM |
| ERP005899_liver | 15 .00 RPM |
| SRP030211_testis | 1 .18 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000001882 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000185515 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000027248 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000016487 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000031201 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014460 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000005392 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000019781 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1327 | 73.66 | 69.07 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_1646 | 80.00 | 97.25 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000007817 retrocopies