Parental gene:

BT.87535, ENSBTAG00000005744

Aliases:None
Description:4-hydroxybenzoate polyprenyltransferase, mitochondrial precursor [Source:RefSeq peptide;Acc:NP_001039358]
Organism:Cow (Bos taurus)
Coordinates:6:99812237..99839387(-)


>ENSBTAG00000005744
ATGCTGGGTTCGTGCGGCGCGGGACTCGTGCGGGGCCTGCGGGCAGAGACTCAGGCATGGCTGTGGGGCACGCGCGGCCG
CTCCCTGGCCCTGGTGCACGCGGCCCGCGGGCTCCACGCGGCGAACTGGCAGCCCTCGCCCGGGCAGGGGCCGCGCGGGC
GTCCGCTGAGCCTGTCGGCAGCCGCGGTCGTAAACTCGGCGCCCCGCCCTCTGCAGCCCTACCTGCGCCTCATGCGGTTG
GATAAGCCCATAGGAACCTGGCTGCTGTATCTGCCGTGTACTTGGAGCATTGGCCTGGCAGCAGACCCAGGTTGTCTCCC
AGACTGGTACATGTTATCCCTGTTTGGCACTGGAGCTGTTCTGATGCGTGGAGCCGGCTGTACTATTAACGACATGTGGG
ACCGGGACTATGATAAAAAGGTTACAAGAACAGCAAGTCGCCCAATAGCTGCTGGAGACATTTCAACTTTTCGGTCCTTT
GTTTTTCTTGGGGGACAGCTGACCTTGGCCCTGGGCGTTCTACTGTGTCTGAATTACTACAGTATAGCTCTTGGAGCAGC
ATCCCTACTTCTTGTCACCACCTACCCGCTAATGAAACGAATTACATACTGGCCTCAGTTAGCCTTGGGGTTGACATTTA
ATTGGGGAGCGTTGCTTGGATGGTCTGCTGTCAAGGGCTCCTGTGATCCATCTGTTTGCCTTCCTCTCTATTTTTCTGGA
ATTATGTGGACTCTGATATACGATACTATCTATGCCCATCAGGATAAGAAGGATGATGCTTTGATTGGGCTTAAGTCCAC
GGCACTGCTGTTCCGTGAAGACACCAAGAAGTGGCTCAGTGGCTTCAGTGTGGCCATGCTGGGGGCACTGAGCCTGGTGG
GAGTGAACAGTGGTCAGACTATGCCCTACTACACTGCCCTGGCTGCTGTGGGAGCCCATCTCGCTCACCAGATTTACACT
CTGGACATCCACAGACCTGAGGACTGTTGGGAAAAGTTCACCTCCAACCGAACAATAGGACTCATAATTTTTTTAGGGAT
TGTCCTTGGGAACTTGTGCAAAGCAAAGGAGACAGATAAAACAAGGAAAAATATAGAAAATAGAATGGAAAATTAG

Library Parental gene expression (RPM)
SRP017611_brain 7 .90 RPM
SRP017611_kidney 42 .20 RPM
SRP017611_liver 21 .60 RPM
ERP005899_muscle 40 .49 RPM
ERP005899_liver 62 .58 RPM
SRP030211_testis 10 .26 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005006 ortholog_one2one 1 retrogene
retro_amel_1898,
Cavia porcellus ENSCPOG00000011458 ortholog_one2one 1 retrogene
retro_cpor_1202,
Equus caballus ENSECAG00000012542 ortholog_one2one 1 retrogene
retro_ecab_432,
Myotis lucifugus ENSMLUG00000015267 ortholog_one2one 1 retrogene
retro_mluc_1776,
Mus musculus ENSMUSG00000029319 ortholog_one2one 1 retrogene
retro_mmus_2883,
Tarsius syrichta ENSTSYG00000013801 ortholog_one2one 30 retrogenes
retro_tsyr_1015, retro_tsyr_1155, retro_tsyr_1173, retro_tsyr_1180, retro_tsyr_1207, retro_tsyr_1235, retro_tsyr_1327, retro_tsyr_1335, retro_tsyr_1385, retro_tsyr_1451, retro_tsyr_1491, retro_tsyr_1646, retro_tsyr_1709, retro_tsyr_1742, retro_tsyr_2015, retro_tsyr_2062, retro_tsyr_2087, retro_tsyr_2136, retro_tsyr_2146, retro_tsyr_466, retro_tsyr_513, retro_tsyr_533, retro_tsyr_54, retro_tsyr_548, retro_tsyr_607, retro_tsyr_619, retro_tsyr_654, retro_tsyr_776, retro_tsyr_839, retro_tsyr_995,
Tursiops truncatus ENSTTRG00000005647 ortholog_one2one 1 retrogene
retro_ttru_1726,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1835 84.21 50.94
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Download FASTA sequences of all ENSBTAG00000005744 retrocopies