Parental gene: | EEF2, ENSBTAG00000004258 |
| Aliases: | EEF2, EF-2 |
| Description: | Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q3SYU2] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 7:21252437..21261327(+) |
>ENSBTAG00000004258
ATGGTGAACTTCACAGTAGACCAGATCCGGGCCATCATGGACAAGAAGGCCAACATCCGGAACATGTCTGTCATTGCCCA
CGTGGACCATGGCAAATCCACTCTGACGGACTCCCTTGTGTGCAAGGCGGGTATCATCGCCTCTGCCCGGGCTGGGGAGA
CCCGCTTCACTGACACCCGGAAGGATGAGCAGGAGCGTTGCATCACCATCAAGTCAACGGCCATCTCCCTTTTCTACGAG
CTTTCAGAGAACGACTTGAATTTCATCAAGCAGAGCAAGGATGGCTCTGGCTTCCTCATCAACCTCATCGACTCCCCTGG
GCACGTCGACTTTTCCTCAGAGGTGACAGCTGCACTCCGTGTCACTGACGGTGCCTTGGTGGTGGTGGACTGCGTGTCGG
GTGTGTGTGTGCAGACAGAGACGGTGCTGCGCCAGGCCATCGCTGAGCGCATCAAGCCAGTGCTGATGATGAACAAGATG
GACCGGGCCCTGCTTGAGCTGCAGCTGGAGCCTGAGGAGCTCTACCAAACCTTCCAGCGCATCGTGGAGAACGTCAACGT
CATCATCTCCACTTACGGCGAGGGCGAGAGCGGCCCCATGGGCAACATCATGATCGACCCCGTCCTTGGTACTGTTGGCT
TCGGGTCTGGTCTCCACGGTTGGGCCTTTACCCTGAAGCAGTTTGCCGAGATGTATGTGGCCAAGTTTGCTGCCAAGGGC
GAGGGACAGCTAGGGCCTGCTGAGCGGGCCAAGAAGGTGGAGGACATGATGAAAAAGCTGTGGGGAGACCGGTACTTTGA
TCCAGCCACCGGCAAGTTCAGCAAGTCAGCCAACAGCCCTGATGGCAAGAAGCTGCCACGGACGTTCTGCCAGCTCATCC
TGGACCCAATCTTCAAGGTGTTTGATGCAATCATGAACTTCAAGAAAGAGGAGACTGCAAAACTAATTGAAAAACTGGAC
ATCAAGTTGGACAGTGAAGATAAGGACAAGGAGGGCAAACCGCTTCTGAAGGCTGTGATGCGCCGCTGGCTGCCTGCTGG
GGATGCCCTGCTGCAGATGATCACCATCCACCTGCCTTCCCCTGTGACGGCCCAGAAGTACCGCTGTGAGCTCCTGTACG
AGGGGCCCCCAGACGATGAGGCAGCCATGGGCATTAAAAGCTGTGATCCCAAAGGCCCTCTCATGATGTACATTTCCAAA
ATGGTGCCGACCTCTGACAAAGGTCGGTTCTATGCTTTCGGCCGGGTCTTCTCAGGGCTGGTGTCTACTGGCCTGAAGGT
CCGCATCATGGGACCCAACTATACTCCTGGGAAGAAGGAGGACCTGTACCTGAAGCCGATCCAGAGGACAATCCTGATGA
TGGGCCGTTACGTGGAGCCCATCGAGGATGTGCCTTGTGGCAACATTGTGGGCCTGGTGGGCGTGGACCAGTTCCTGGTG
AAGACTGGCACCATCACCACCTTTGAGCATGCCCACAACATGCGGGTGATGAAGTTCAGTGTGAGCCCTGTTGTCAGGGT
TGCTGTGGAGGCCAAGAACCCGGCCGACCTGCCCAAGCTGGTGGAAGGTCTGAAGCGGCTGGCCAAGTCGGACCCCATGG
TGCAGTGCATCATCGAGGAGTCCGGGGAGCACATTATCGCGGGGGCTGGGGAGCTGCACTTGGAGATCTGCCTCAAGGAC
CTGGAGGAGGATCACGCTTGCATCCCCATCAAGAAATCTGACCCAGTTGTCTCGTACCGGGAGACTGTCAGCGAGGAGTC
AAACGTGCTCTGCCTATCCAAGTCCCCCAACAAGCACAATAGGCTTTATATGAAGGCGCGGCCCTTCCCTGACGGCCTGG
CTGAGGACATCGACAAGGGCGAGGTGTCCGCCCGCCAGGAGCTCAAGCAGCGGGCCCGCTACCTGGCTGAGAAGTACGAG
TGGGATGTGGCCGAGGCCCGTAAGATCTGGTGCTTCGGCCCTGATGGCACGGGCCCCAACATCCTCACGGACATCACCAA
GGGTGTGCAATACCTCAATGAAATCAAGGACAGTGTGGTAGCTGGCTTCCAGTGGGCCACCAAAGAGGGGGCACTGTGCG
AGGAGAACATGCGGGGCGTGCGCTTTGACGTCCATGATGTGACGCTGCACGCTGATGCCATCCACCGTGGGGGTGGCCAG
ATCATCCCCACGGCTCGGCGCTGCCTGTATGCCAGTGTGCTGACTGCCCAGCCCCGGCTCATGGAGCCCATCTATCTTGT
GGAGATCCAGTGTCCAGAACAAGTGGTTGGTGGCATCTACGGTGTCCTGAACAGGAAGCGGGGCCACGTCTTTGAGGAGA
CCCAGGTGGCCGGCACCCCCATGTTTGTTGTGAAGGCCTACCTTCCTGTCAATGAGTCCTTTGGCTTCACTGCTGACCTG
AGGTCCAACACGGGCGGCCAGGCCTTCCCCCAGTGTGTGTTCGACCACTGGCAGATCCTGCCCGGTGACCCCTTTGACAA
CACCAGCCGCCCCAGTCAGGTAGTGGCGGAGACACGCAAGCGCAAAGGCCTGAAGGAAGGCATCCCAGCCCTGGACAACT
TCCTGGACAAGTTGTAG
ATGGTGAACTTCACAGTAGACCAGATCCGGGCCATCATGGACAAGAAGGCCAACATCCGGAACATGTCTGTCATTGCCCA
CGTGGACCATGGCAAATCCACTCTGACGGACTCCCTTGTGTGCAAGGCGGGTATCATCGCCTCTGCCCGGGCTGGGGAGA
CCCGCTTCACTGACACCCGGAAGGATGAGCAGGAGCGTTGCATCACCATCAAGTCAACGGCCATCTCCCTTTTCTACGAG
CTTTCAGAGAACGACTTGAATTTCATCAAGCAGAGCAAGGATGGCTCTGGCTTCCTCATCAACCTCATCGACTCCCCTGG
GCACGTCGACTTTTCCTCAGAGGTGACAGCTGCACTCCGTGTCACTGACGGTGCCTTGGTGGTGGTGGACTGCGTGTCGG
GTGTGTGTGTGCAGACAGAGACGGTGCTGCGCCAGGCCATCGCTGAGCGCATCAAGCCAGTGCTGATGATGAACAAGATG
GACCGGGCCCTGCTTGAGCTGCAGCTGGAGCCTGAGGAGCTCTACCAAACCTTCCAGCGCATCGTGGAGAACGTCAACGT
CATCATCTCCACTTACGGCGAGGGCGAGAGCGGCCCCATGGGCAACATCATGATCGACCCCGTCCTTGGTACTGTTGGCT
TCGGGTCTGGTCTCCACGGTTGGGCCTTTACCCTGAAGCAGTTTGCCGAGATGTATGTGGCCAAGTTTGCTGCCAAGGGC
GAGGGACAGCTAGGGCCTGCTGAGCGGGCCAAGAAGGTGGAGGACATGATGAAAAAGCTGTGGGGAGACCGGTACTTTGA
TCCAGCCACCGGCAAGTTCAGCAAGTCAGCCAACAGCCCTGATGGCAAGAAGCTGCCACGGACGTTCTGCCAGCTCATCC
TGGACCCAATCTTCAAGGTGTTTGATGCAATCATGAACTTCAAGAAAGAGGAGACTGCAAAACTAATTGAAAAACTGGAC
ATCAAGTTGGACAGTGAAGATAAGGACAAGGAGGGCAAACCGCTTCTGAAGGCTGTGATGCGCCGCTGGCTGCCTGCTGG
GGATGCCCTGCTGCAGATGATCACCATCCACCTGCCTTCCCCTGTGACGGCCCAGAAGTACCGCTGTGAGCTCCTGTACG
AGGGGCCCCCAGACGATGAGGCAGCCATGGGCATTAAAAGCTGTGATCCCAAAGGCCCTCTCATGATGTACATTTCCAAA
ATGGTGCCGACCTCTGACAAAGGTCGGTTCTATGCTTTCGGCCGGGTCTTCTCAGGGCTGGTGTCTACTGGCCTGAAGGT
CCGCATCATGGGACCCAACTATACTCCTGGGAAGAAGGAGGACCTGTACCTGAAGCCGATCCAGAGGACAATCCTGATGA
TGGGCCGTTACGTGGAGCCCATCGAGGATGTGCCTTGTGGCAACATTGTGGGCCTGGTGGGCGTGGACCAGTTCCTGGTG
AAGACTGGCACCATCACCACCTTTGAGCATGCCCACAACATGCGGGTGATGAAGTTCAGTGTGAGCCCTGTTGTCAGGGT
TGCTGTGGAGGCCAAGAACCCGGCCGACCTGCCCAAGCTGGTGGAAGGTCTGAAGCGGCTGGCCAAGTCGGACCCCATGG
TGCAGTGCATCATCGAGGAGTCCGGGGAGCACATTATCGCGGGGGCTGGGGAGCTGCACTTGGAGATCTGCCTCAAGGAC
CTGGAGGAGGATCACGCTTGCATCCCCATCAAGAAATCTGACCCAGTTGTCTCGTACCGGGAGACTGTCAGCGAGGAGTC
AAACGTGCTCTGCCTATCCAAGTCCCCCAACAAGCACAATAGGCTTTATATGAAGGCGCGGCCCTTCCCTGACGGCCTGG
CTGAGGACATCGACAAGGGCGAGGTGTCCGCCCGCCAGGAGCTCAAGCAGCGGGCCCGCTACCTGGCTGAGAAGTACGAG
TGGGATGTGGCCGAGGCCCGTAAGATCTGGTGCTTCGGCCCTGATGGCACGGGCCCCAACATCCTCACGGACATCACCAA
GGGTGTGCAATACCTCAATGAAATCAAGGACAGTGTGGTAGCTGGCTTCCAGTGGGCCACCAAAGAGGGGGCACTGTGCG
AGGAGAACATGCGGGGCGTGCGCTTTGACGTCCATGATGTGACGCTGCACGCTGATGCCATCCACCGTGGGGGTGGCCAG
ATCATCCCCACGGCTCGGCGCTGCCTGTATGCCAGTGTGCTGACTGCCCAGCCCCGGCTCATGGAGCCCATCTATCTTGT
GGAGATCCAGTGTCCAGAACAAGTGGTTGGTGGCATCTACGGTGTCCTGAACAGGAAGCGGGGCCACGTCTTTGAGGAGA
CCCAGGTGGCCGGCACCCCCATGTTTGTTGTGAAGGCCTACCTTCCTGTCAATGAGTCCTTTGGCTTCACTGCTGACCTG
AGGTCCAACACGGGCGGCCAGGCCTTCCCCCAGTGTGTGTTCGACCACTGGCAGATCCTGCCCGGTGACCCCTTTGACAA
CACCAGCCGCCCCAGTCAGGTAGTGGCGGAGACACGCAAGCGCAAAGGCCTGAAGGAAGGCATCCCAGCCCTGGACAACT
TCCTGGACAAGTTGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 801 .63 RPM |
| SRP017611_kidney | 1021 .25 RPM |
| SRP017611_liver | 831 .73 RPM |
| ERP005899_muscle | 3452 .20 RPM |
| ERP005899_liver | 319 .39 RPM |
| SRP030211_testis | 590 .80 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000019158 | ortholog_one2one | 1 retrogene | |
| Latimeria chalumnae | ENSLACG00000011124 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022767 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000000750 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000034994 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_539 | 79.20 | 72.14 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_1809 | 92.10 | 63.29 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000004258 retrocopies