Parental gene: | DPH3, ENSBTAG00000003916 |
| Aliases: | None |
| Description: | DPH3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q1LZC9] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 1:155004506..155009732(-) |
>ENSBTAG00000003916
ATGGCGGTATTTCACGATGAGGTGGAGATCGAGGACTTCCAATACGACGAAGACTCGGAGACCTACTTCTACCCCTGCCC
GTGTGGGGATAACTTCTGCATCACCAAGGAAGATTTGGAGAATGGGGAAGATGTGGCAACCTGCCCTAGCTGCTCTCTCA
TTATAAAAGTGATTTATGACAAGGATCAGTTCACGTGTGGAGAGACAGTCCCAGCCCCTTCCACCAACAAAGAACTAGTT
AAATGCTGA
ATGGCGGTATTTCACGATGAGGTGGAGATCGAGGACTTCCAATACGACGAAGACTCGGAGACCTACTTCTACCCCTGCCC
GTGTGGGGATAACTTCTGCATCACCAAGGAAGATTTGGAGAATGGGGAAGATGTGGCAACCTGCCCTAGCTGCTCTCTCA
TTATAAAAGTGATTTATGACAAGGATCAGTTCACGTGTGGAGAGACAGTCCCAGCCCCTTCCACCAACAAAGAACTAGTT
AAATGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 24 .44 RPM |
| SRP017611_kidney | 24 .30 RPM |
| SRP017611_liver | 10 .80 RPM |
| ERP005899_muscle | 15 .73 RPM |
| ERP005899_liver | 17 .30 RPM |
| SRP030211_testis | 26 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000005881 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000012030 | possible_ortholog | 1 retrogene | |
| Equus caballus | ENSECAG00000016591 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000009790 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000016272 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000006355 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000022108 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000025650 | ortholog_one2many | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000025472 | ortholog_one2many | 3 retrogenes | |
| Mus musculus | ENSMUSG00000021905 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000011675 | possible_ortholog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000007739 | possible_ortholog | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_797 | 70.24 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_967 | 76.83 | 98.78 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000003916 retrocopies