Parental gene:

BT.20216, ENSBTAG00000002866

Aliases:None
Description:Ribose-5-phosphate isomerase [Source:UniProtKB/Swiss-Prot;Acc:Q3T186]
Organism:Cow (Bos taurus)
Coordinates:11:47220159..47254704(-)


>ENSBTAG00000002866
ATGCAGCGCCCCGGGCCCTTCAGCACCCTCTACGGGCGGGTCCTGGCCCCGCTGCCCGGGCGGGCCGGGGGCGCGGCCTC
TGGTGGAGGCGGGAACAGCTGGGGCGTTCCGGGTTCCCACGTGCAGTTGCCGGGACGTTCGCAGTTCGGCGCTGGCAGCA
CAAGTACCGGCGTCAGGGAGACTAACATCGTCTGTCCGGGCCCGTCCGCGATGTCAAAGGCCGAGGAGGCCAAGAAGCTG
GCTGGCCGCGCGGCCGTGGAGAACCACGTGAGGAATAACCAAGTGCTGGGAATTGGGAGTGGTTCTACAATTGTCCACGC
TGTGCAGCGAATAGCTGAAAGAGTGGAACAAGAGAATCTGAAGCTCGTCTGTATTCCCACCTCCTTCCAGGCCCGTCAAC
TCATCCTGCAGTATGGCTTAACTCTCAGTGACCTGGACCGACACCCAGAGATCGATCTTGCCATCGATGGTGCTGATGAA
GTCGACGCTGACCTCAACCTCATCAAGGGTGGTGGAGGCTGCCTGACCCAGGAGAAGATTGTGGCCGGCAATGCCAGTCG
CTTCATCGTGATTGCCGATTTCAGGAAAGATTCAAAGAACCTCGGGGATCAGTGGCACAAGGGCATCCCCATTGAGGTCA
TCCCTATGGCCTATGTCCCAGTGAGCCGAACTGTGACCCAGAAGTTTGGGGGCGTGATTGAACTTCGCATGGCCGTCAAC
AAGGCAGGTCCTGTGGTAACGGATAATGGGAACTTTATCCTGGACTGGAAGTTTGACCGGGTCCACAAATGGAGTGAAGT
GAACATAGCCATCAAAATGATCCCAGGTGTGGTGGACACGGGGCTGTTCATCAACATGGCCGAGAGAGTCTACTTCGGGA
TGCAGGACGGCTCGGTGAACATGAGGGAGAAGCCGTTCTGA

Library Parental gene expression (RPM)
SRP017611_brain 2 .10 RPM
SRP017611_kidney 5 .75 RPM
SRP017611_liver 4 .68 RPM
ERP005899_muscle 15 .41 RPM
ERP005899_liver 1 .87 RPM
SRP030211_testis 23 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Equus caballus ENSECAG00000011754 ortholog_one2one 1 retrogene
retro_ecab_645,
Macropus eugenii ENSMEUG00000008256 ortholog_one2one 1 retrogene
retro_meug_1506,
Microcebus murinus ENSMICG00000006462 ortholog_one2one 1 retrogene
retro_mmur_722,
Myotis lucifugus ENSMLUG00000005384 ortholog_one2one 1 retrogene
retro_mluc_1129,
Monodelphis domestica ENSMODG00000009649 ortholog_one2one 1 retrogene
retro_mdom_320,
Oryctolagus cuniculus ENSOCUG00000006840 ortholog_one2many 3 retrogenes
retro_ocun_1541, retro_ocun_1708, retro_ocun_1709,
Otolemur garnettii ENSOGAG00000034178 ortholog_one2one 2 retrogenes
retro_ogar_1218, retro_ogar_518,
Tarsius syrichta ENSTSYG00000006406 ortholog_one2one 8 retrogenes
retro_tsyr_1081, retro_tsyr_1088, retro_tsyr_1902, retro_tsyr_2028, retro_tsyr_393, retro_tsyr_709, retro_tsyr_725, retro_tsyr_994,
Tursiops truncatus ENSTTRG00000000876 ortholog_one2one 2 retrogenes
retro_ttru_1175, retro_ttru_799,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1373 73.56 84.64
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Download FASTA sequences of all ENSBTAG00000002866 retrocopies