Parental gene:

RDH12, ENSAMEG00000008036

Aliases:None
Description:retinol dehydrogenase 12 (all-trans/9-cis/11-cis) [Source:HGNC Symbol;Acc:19977]
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL193220.1:7824..16016(-)


>ENSAMEG00000008036
GAAGTTGAAAAAATGCTGGCTGTCTTGGGACTGCTCACCACCTTCCTTTCTTTCCTGTACTTCACAGCTCCATCCATCAG
GAAGTTCTTTGCCGGTGGGGTTTGTAGATCAAATGTGCAGCTTCCGGGGAAGGTAGTGGTGATCACTGGCGCCAACACGG
GCATCGGCAAGGAGACAGCCAGAGAGCTGGCTCGCAGAGGAGCCCGAGTATACATTGCCTGCAGAGATGTACTGAAGGGG
GAGTCTGCAGCCAGTGAAATCCGAGCTGATACAAAGAACTCCCAGGTGCTGGTGCGGAAACTGGACCTATCTGATACCAA
ATCCATCCGAGCCTTTGCTGAGGGCTTTCTGGCAGAGGAAAAGCATCTCCATATTCTGATCAACAATGCAGGGGTGATGA
TGTGTCCATATTCTAAGACAGCTGATGGCTTTGAAAGCCACTTGGGAGTCAACCACCTAGGCCACTTTCTTCTCACCCAC
TTGCTCCTGGAGCGGCTGAAGGAGTCCACCCCTGCACGGGTGGTAAACCTGTCATCGGTGGTTCACCATGCTGGCAAGAT
TCACTTCCATGACCTCCAGAGTGAGAAGTACTACAGCCGAAGTTTGGCTTATTGCCACAGCAAGCTGGCCAATGTGCTTT
TTACTCGTGAGCTGGCTAAGAGGCTCCAAGGCACGGGCGTCACCACCTATGCTGTGCACCCAGGCATCGTCAGCTCTGAG
CTCGTCCGACACTCCTTCCTGCTGTGCCTACTCTGGAGGATCTTCTCCCCCTTCATCAAGTCGGCTTGGGAGGGCGCGCA
GACCAGCCTGCACTGTGCTCTGGCTGAGGGCCTTGAGCCGCTGAGTGGCAAGTACTTCAGTGACTGCAAGAAGGCCTGGG
TGTCTCCAAAATCTCGAGATAACAAAACGGCAGAGCGCTTGTGGAATGTCAGCTGTGAGCTTCTAGGAATCCAGTGGCAG
TAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003306 within_species_paralog 1 retrogene
retro_amel_114,
Canis familiaris ENSCAFG00000016446 ortholog_one2one 1 retrogene
retro_cfam_2068,
Felis catus ENSFCAG00000014092 ortholog_one2one 1 retrogene
retro_fcat_1910,
Loxodonta africana ENSLAFG00000022637 ortholog_one2one 1 retrogene
retro_lafr_847,
Macropus eugenii ENSMEUG00000001473 ortholog_one2one 1 retrogene
retro_meug_41,
Meleagris gallopavo ENSMGAG00000011960 ortholog_one2many 1 retrogene
retro_mgal_16,
Microcebus murinus ENSMICG00000010855 ortholog_one2one 1 retrogene
retro_mmur_432,
Ornithorhynchus anatinus ENSOANG00000015759 ortholog_one2one 1 retrogene
retro_oana_89,
Procavia capensis ENSPCAG00000009359 ortholog_one2one 1 retrogene
retro_pcap_1,
Pelodiscus sinensis ENSPSIG00000010721 ortholog_one2many 1 retrogene
retro_psin_24,
Sarcophilus harrisii ENSSHAG00000012445 ortholog_one2one 1 retrogene
retro_shar_41,
Drosophila melanogaster FBgn0033203 ortholog_many2many 1 retrogene
retro_dmel_79,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_673 70.15 61.88
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Download FASTA sequences of all ENSAMEG00000008036 retrocopies