Parental gene:

RAB5C, ENSAMEG00000006003

Aliases:None
Description:RAB5C, member RAS oncogene family [Source:HGNC Symbol;Acc:9785]
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL192892.1:644868..648882(-)


>ENSAMEG00000006003
ATGGCGGGTCGGGGAGGTGCAGCGCGACCCAATGGACCAGCTGCTGGGAACAAGATCTGTCAGTTTAAGCTGGTCCTGCT
GGGGGAGTCTGCGGTAGGCAAATCTAGCCTCGTCCTCCGCTTCGTCAAGGGACAGTTCCATGAGTACCAGGAGAGCACAA
TTGGAGCGGCCTTCCTCACACAGACAGTCTGTTTGGACGACACAACAGTCAAATTTGAGATCTGGGACACAGCTGGACAG
GAGCGGTATCACAGCCTGGCCCCCATGTACTATCGGGGGGCCCAGGCTGCCATCGTGGTCTATGACATCACCAATACAGA
TACATTTGCACGGGCCAAGAACTGGGTGAAGGAGCTACAGAGGCAGGCCAGCCCCAACATCGTCATCGCGCTCGCGGGGA
ACAAGGCGGACCTGGCCAGCAAGAGAGCTGTGGAATTCCAGGAAGCACAAGCCTATGCAGACGACAACAGTTTGCTGTTC
ATGGAGACATCGGCAAAGACTGCAATGAACGTGAATGAAATTTTCATGGCAATAGCTAAGAAGCTTCCCAAGAATGAGCC
CCAGAATGCAGCTGGTGCTCCGAGCCGGAACCGAGGTGTGGACCTCCAGGAGAACAACCCAGCCAGCCGGAGCCAGTGCT
GCAGCAACTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000954 within_species_paralog 1 retrogene
retro_amel_958,
Ailuropoda melanoleuca ENSAMEG00000012646 within_species_paralog 1 retrogene
retro_amel_617,
Callithrix jacchus ENSCJAG00000000472 possible_ortholog 2 retrogenes
retro_cjac_189, retro_cjac_1948,
Macropus eugenii ENSMEUG00000005614 ortholog_one2one 1 retrogene
retro_meug_2118,
Monodelphis domestica ENSMODG00000014792 ortholog_one2one 1 retrogene
retro_mdom_1399,
Otolemur garnettii ENSOGAG00000009456 ortholog_one2one 2 retrogenes
retro_ogar_2175, retro_ogar_985,
Pongo abelii ENSPPYG00000008398 possible_ortholog 1 retrogene
retro_pabe_2664,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_543 56.47 77.78
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Download FASTA sequences of all ENSAMEG00000006003 retrocopies