Parental gene:

MRPL22, ENSACAG00000003875

Aliases:None
Description:None
Organism:Anole lizard (Anolis carolinensis)
Coordinates:GL343205.1:880989..896751(+)


>ENSACAG00000003875
GGAGTTGCACTCCCTTCTAAAACCTCACTTTTCATCTTGTCTTTCAGGGTATTAACATCTTTTGGCACTCCTCTTTTCTG
TAATATTCATACAAGTGCATCTCTTGGGAATTTGGGAAGATGGGAAAAAAAGAATAGAGTTGTTTATCCCCCACAGCAGC
CAGGAGAACCTCGAAGACCTGCAGAAATATATCACTGTCGAAGAGATATTAAATACAGCAAGGACAAGATGTGGTACCTG
GCAAAATTGATACGTGGAATGACCATTGATGAGGCACTAGCTCAGTTGGAATTCAATGATAAAAAAGGAGCAAAGGTAAT
CAAAGAGGTCCTTCTGGAAGCACAAGAAATGGCAGTGAGAAAATGTAATGTAGAGTTCAAATCCAACTTACACATTGCTG
AATCTTTCTCTGGAAAAGGCCACTACCTGAAAAGGATCCGCTATCATGGAAAAGGTTTTTTTGGCATTATGGACAAAGTC
AAGTGTCATTACTTTGTGAAATTAGTAGAAGGTCCACCTCCGCCTCCAGAACCACCAAAGACTGGCTTTGATCAAGCTAA
GGAGTATGTCCAGCAGCTTCGTAGCCGAACCATTATTAACACACTGTAG

Library Parental gene expression (RPM)
SRP009831_adrenal 24 .81 RPM
SRP009831_brain 9 .18 RPM
SRP009831_dewlap 6 .29 RPM
SRP009831_embryo 29 .19 RPM
SRP009831_heart 11 .83 RPM
SRP009831_liver 22 .66 RPM
SRP009831_lung 13 .35 RPM
SRP009831_ovary 8 .42 RPM
SRP009831_skeletal_muscle 8 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019457 ortholog_one2one 1 retrogene
retro_btau_1348,
Canis familiaris ENSCAFG00000017605 ortholog_one2one 2 retrogenes
retro_cfam_1456, retro_cfam_584,
Callithrix jacchus ENSCJAG00000007325 ortholog_one2one 2 retrogenes
retro_cjac_2187, retro_cjac_2558,
Homo sapiens ENSG00000082515 ortholog_one2one 1 retrogene
retro_hsap_3041,
Gorilla gorilla ENSGGOG00000010232 ortholog_one2one 1 retrogene
retro_ggor_2095,
Macaca mulatta ENSMMUG00000021229 ortholog_one2one 1 retrogene
retro_mmul_1889,
Mus musculus ENSMUSG00000020514 ortholog_one2one 1 retrogene
retro_mmus_1294,
Nomascus leucogenys ENSNLEG00000016692 ortholog_one2one 1 retrogene
retro_nleu_1928,
Otolemur garnettii ENSOGAG00000016777 ortholog_one2one 1 retrogene
retro_ogar_1042,
Pongo abelii ENSPPYG00000015979 ortholog_one2one 1 retrogene
retro_pabe_2436,
Pan troglodytes ENSPTRG00000017453 ortholog_one2one 1 retrogene
retro_ptro_1997,
Vicugna pacos ENSVPAG00000001170 ortholog_one2one 1 retrogene
retro_vpac_294,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_88 93.04 56.93
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Download FASTA sequences of all ENSACAG00000003875 retrocopies