Parental gene: | emb1220, Bra031522 |
| Aliases: | None |
| Description: | AT1G60170 (E=4e-222) emb1220 | emb1220 (embryo defective 1220) |
| Organism: | Chinese cabbage (Brassica rapa) |
| Coordinates: | A01:16747988..16750137(+) |
>Bra031522
ATGGCAACTCTTGAAGATTCTTTCCTCGCAGACCTTGACGACTTATCTGACAATGAAGCAGAACTGGATGAGTCAGATGG
TGATGATGCGAAAAAGGATGAAGAAGATATCGACATGGACATGGCTGACTTAGAAACCCTTAACTACGATGATCTCGATT
CCGTTTCTAAGCTCCAGAAATCTCAGAGATACCTTGACATTATGCAGAAAGTGGAAGAGGCTCTTGGAAAGGAATCTGAT
GGAACGGAGAAAGGAACTGTGCTAGAAGACGATCCTGAATACAAGCTAATCGTGGATTGCAACCAGCTCTCGGTTGACAT
TGAGAACGAGATTGCCATCGTCCACAACTTCATCCGTGACAAGTACAGACTCAAGTTTCAAGAGCTTGAATCTCTGGTAA
ACCACCCTATTGACTACGCCCGCGTTGTCAAAAAGATAGGCAATGAGACGGATTTAACTCTCGTTGATCTTGAAGGCCTT
CTTCCATCTGCTATTATCATGGTTGTTTCAGTCACTGCCTTGACCACCAAAGGGAGCCCACTCCCGGAGGATGTCCTGCA
GAAGACTCTAGAGGCTTGTGATCGAGCTTTAGATCTTGATTCCGCTAGGAAGAAGGTTCTTGACTTTGTCGAAAGCAAGA
TGGGGTCTATTGCACCGAATCTTTCTGCTATTGTCGGGAGTGCTGTTGCAGCCAAGCTCATGGGAACTGCTGGAGGTTTG
TCGGCGCTTGCTAAAATGCCTGCCTGTAATGTACAAGTTCTTGGCCACAAGAGGAAGAACCTTGCCGGGTTCTCTAGTGC
AACGTCACAGTTACGTGTGGGGTATCTGGAGCAGACGGAGATTTTCCAGAGCACGCCTCCCGCGCTTAAGAGTCGCGCTG
GCAGGATCTTGGCTGCAAAATCTACTTTGGCGGCGAGAGTTGATGCTACTAGAGGAGACCCGTCGGGAACGAATGGGAAA
GCTTTGAGGGAAGAGATCCGTAAGAAGATTGAGAAGTGGCAAGAACCTCCTCCCGCAAGGCAGCCTAAACCGCTTCCCGT
TCCTGATTCCGAGCCTAAAAAAAGAAGAGGTGGTCGCCGTTTAAGGAAAATGAAAGAAAGGTATGCAGTGACAGACATGA
GGAAGCTTGCCAACAGGATGGCCTTTGGTACACCCGAAGAGAGCTCTCTTGGTGATGGGTTAGGTGAAGGATACGGGATG
CTTGGCCAGGCTGGGAGCAACAGGCTGCGTATATCCAGTGTTCCCAGCAAGCTCAAGATTAATCCTACCATCGCCAAAAA
GCTGAAAGAAAGAAACTATGCAGGTGGTGCCACTACCTCTGGATTGACATCGAGTCTGGCTTTTACTCCTGTGCAGGGAA
TAGAGCTGTGCAATCCTCAACAGGCTTTAGGGTTAGGCAGTGGGACTCAAAGCACTTACTTTTCAGAGTCAGGGACCTTC
TCTAAGCTCAAGAAGATATAA
ATGGCAACTCTTGAAGATTCTTTCCTCGCAGACCTTGACGACTTATCTGACAATGAAGCAGAACTGGATGAGTCAGATGG
TGATGATGCGAAAAAGGATGAAGAAGATATCGACATGGACATGGCTGACTTAGAAACCCTTAACTACGATGATCTCGATT
CCGTTTCTAAGCTCCAGAAATCTCAGAGATACCTTGACATTATGCAGAAAGTGGAAGAGGCTCTTGGAAAGGAATCTGAT
GGAACGGAGAAAGGAACTGTGCTAGAAGACGATCCTGAATACAAGCTAATCGTGGATTGCAACCAGCTCTCGGTTGACAT
TGAGAACGAGATTGCCATCGTCCACAACTTCATCCGTGACAAGTACAGACTCAAGTTTCAAGAGCTTGAATCTCTGGTAA
ACCACCCTATTGACTACGCCCGCGTTGTCAAAAAGATAGGCAATGAGACGGATTTAACTCTCGTTGATCTTGAAGGCCTT
CTTCCATCTGCTATTATCATGGTTGTTTCAGTCACTGCCTTGACCACCAAAGGGAGCCCACTCCCGGAGGATGTCCTGCA
GAAGACTCTAGAGGCTTGTGATCGAGCTTTAGATCTTGATTCCGCTAGGAAGAAGGTTCTTGACTTTGTCGAAAGCAAGA
TGGGGTCTATTGCACCGAATCTTTCTGCTATTGTCGGGAGTGCTGTTGCAGCCAAGCTCATGGGAACTGCTGGAGGTTTG
TCGGCGCTTGCTAAAATGCCTGCCTGTAATGTACAAGTTCTTGGCCACAAGAGGAAGAACCTTGCCGGGTTCTCTAGTGC
AACGTCACAGTTACGTGTGGGGTATCTGGAGCAGACGGAGATTTTCCAGAGCACGCCTCCCGCGCTTAAGAGTCGCGCTG
GCAGGATCTTGGCTGCAAAATCTACTTTGGCGGCGAGAGTTGATGCTACTAGAGGAGACCCGTCGGGAACGAATGGGAAA
GCTTTGAGGGAAGAGATCCGTAAGAAGATTGAGAAGTGGCAAGAACCTCCTCCCGCAAGGCAGCCTAAACCGCTTCCCGT
TCCTGATTCCGAGCCTAAAAAAAGAAGAGGTGGTCGCCGTTTAAGGAAAATGAAAGAAAGGTATGCAGTGACAGACATGA
GGAAGCTTGCCAACAGGATGGCCTTTGGTACACCCGAAGAGAGCTCTCTTGGTGATGGGTTAGGTGAAGGATACGGGATG
CTTGGCCAGGCTGGGAGCAACAGGCTGCGTATATCCAGTGTTCCCAGCAAGCTCAAGATTAATCCTACCATCGCCAAAAA
GCTGAAAGAAAGAAACTATGCAGGTGGTGCCACTACCTCTGGATTGACATCGAGTCTGGCTTTTACTCCTGTGCAGGGAA
TAGAGCTGTGCAATCCTCAACAGGCTTTAGGGTTAGGCAGTGGGACTCAAAGCACTTACTTTTCAGAGTCAGGGACCTTC
TCTAAGCTCAAGAAGATATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Arabidopsis thaliana | AT1G60170 | ortholog_one2one | 1 retrogene | |
| Brassica oleracea | Bo1g091740 | ortholog_one2one | 1 retrogene | |
| Solanum tuberosum | PGSC0003DMG400004771 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_brap_23 | 70.93 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all Bra031522 retrocopies