Parental gene: | BGIOSGA008091 |
| Aliases: | None |
| Description: | None |
| Organism: | Rice subsp. indica (Oryza sativa indica) |
| Coordinates: | 2:13998647..14002976(+) |
>BGIOSGA008091
ATGTCGACCGCCGCCACCGCCCCGCCGCCCGCCGCGGTCCTCCCGGCGGCTCCCCCGCCGTCCTACCCCGCCACCTCCGC
GCCCTCCGCCTCCGCGGCCGCCGCCGAGGACGACGACGACCTCTACGGCCGCCTCAAGTCGCTCCAGCGCCACATGGAGT
TCGTCGAGATACAGGAGGAGTACGTCAAGGACGAGCAGAAGAACCTGAAGCGCGAGCTGCTGCGCGCGCAGGAGGAGGTG
AAGCGGATCCAGTCCGTTCCCCTCGTGATCGGCCAGTTCATGGAGATGGTCGACGGCAACAACGGAATCGTCGGATCCAC
CACCGGGAGCAACTATTATGTGCGGATCCTGAGCACCATCAACCGCGAGCTGCTCAAGCCCTCGGCGTCCGTGGCGCTGC
ACCGCCACTCGAATGCGCTCGTCGACGTGCTGCCGCCCGAGGCGGACTCCAGCATCTCTCTGCTCGGATCATCGGAGAAG
CCCAACGTCACTTATACGGATATTGGAGGATGTGACATCCAAAAACAAGAAATTCGGGAGGCTGTTGAATTACCGCTGAC
ACATCATGAGCTGTACAAGCAGATTGGTATTGATCCTCCAAGAGGTGTGCTTCTGTATGGTCCACCTGGAACTGGCAAAA
CTATGCTCGCCAAAGCTGTGGCACACCACACTACTGCTGCATTTATCAGAGTTGTTGGTTCAGAGTTTGTGCAGAAGTAC
CTGGGTGAGGGACCTAGGATGGTTCGAGATGTATTCCGTTTGGCTAAAGAGAATGCCCCAGCTATCATATTCATCGATGA
GGTTGATGCTATAGCAACTGCTCGTTTTGATGCTCAGACTGGTGCTGACCGAGAAGTTCAGCGTATTCTTATGGAACTAC
TCAATCAGATGGATGGATTTGATCAAACAGTGAATGTGAAGGTTATAATGGCGACCAACAGGGCGGATACCCTAGACCCT
GCTCTGTTACGTCCAGGTAGATTGGACAGGAAAATCGAGTTCCCTCTTCCAGATCGTCGGCAGAAGAGGCTTGTTTTCCA
AGTCTGTACTGCTAAAATGAACTTGAGTGATGAGGTTGATTTGGAAGATTATGTTTCCAGACCAGATAAAATTAGTGCTG
CTGATCCCATGTCTGAGGACTGTAGTGCAGAAGATACTTTTGATGCCATTGTAACTTGTGGCACATCTGTGCTGATTGCT
GCTATCTGTCAAGAAGCTGGTATGCATGCTGTGCGCAAAAATCGGTATGTTATCCTCCCCAAGGACTTCGAGAAGGGTTA
CCGAACCAATGTCAAGAAGCCTGAGACTGACTTTGACTTCTACAAATGA
ATGTCGACCGCCGCCACCGCCCCGCCGCCCGCCGCGGTCCTCCCGGCGGCTCCCCCGCCGTCCTACCCCGCCACCTCCGC
GCCCTCCGCCTCCGCGGCCGCCGCCGAGGACGACGACGACCTCTACGGCCGCCTCAAGTCGCTCCAGCGCCACATGGAGT
TCGTCGAGATACAGGAGGAGTACGTCAAGGACGAGCAGAAGAACCTGAAGCGCGAGCTGCTGCGCGCGCAGGAGGAGGTG
AAGCGGATCCAGTCCGTTCCCCTCGTGATCGGCCAGTTCATGGAGATGGTCGACGGCAACAACGGAATCGTCGGATCCAC
CACCGGGAGCAACTATTATGTGCGGATCCTGAGCACCATCAACCGCGAGCTGCTCAAGCCCTCGGCGTCCGTGGCGCTGC
ACCGCCACTCGAATGCGCTCGTCGACGTGCTGCCGCCCGAGGCGGACTCCAGCATCTCTCTGCTCGGATCATCGGAGAAG
CCCAACGTCACTTATACGGATATTGGAGGATGTGACATCCAAAAACAAGAAATTCGGGAGGCTGTTGAATTACCGCTGAC
ACATCATGAGCTGTACAAGCAGATTGGTATTGATCCTCCAAGAGGTGTGCTTCTGTATGGTCCACCTGGAACTGGCAAAA
CTATGCTCGCCAAAGCTGTGGCACACCACACTACTGCTGCATTTATCAGAGTTGTTGGTTCAGAGTTTGTGCAGAAGTAC
CTGGGTGAGGGACCTAGGATGGTTCGAGATGTATTCCGTTTGGCTAAAGAGAATGCCCCAGCTATCATATTCATCGATGA
GGTTGATGCTATAGCAACTGCTCGTTTTGATGCTCAGACTGGTGCTGACCGAGAAGTTCAGCGTATTCTTATGGAACTAC
TCAATCAGATGGATGGATTTGATCAAACAGTGAATGTGAAGGTTATAATGGCGACCAACAGGGCGGATACCCTAGACCCT
GCTCTGTTACGTCCAGGTAGATTGGACAGGAAAATCGAGTTCCCTCTTCCAGATCGTCGGCAGAAGAGGCTTGTTTTCCA
AGTCTGTACTGCTAAAATGAACTTGAGTGATGAGGTTGATTTGGAAGATTATGTTTCCAGACCAGATAAAATTAGTGCTG
CTGATCCCATGTCTGAGGACTGTAGTGCAGAAGATACTTTTGATGCCATTGTAACTTGTGGCACATCTGTGCTGATTGCT
GCTATCTGTCAAGAAGCTGGTATGCATGCTGTGCGCAAAAATCGGTATGTTATCCTCCCCAAGGACTTCGAGAAGGGTTA
CCGAACCAATGTCAAGAAGCCTGAGACTGACTTTGACTTCTACAAATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Aegilops tauschii | F775_28952 | ortholog_one2many | 1 retrogene | |
| Leersia perrieri | LPERR02G11870 | ortholog_one2one | 1 retrogene | |
| Oryza barthii | OBART02G14640 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC02G13140 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA02G0127200 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS02G0325100 | ortholog_one2one | 1 retrogene | |
| Triticum aestivum | Traes_2AL_80D15B4FB | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oind_47 | 52.29 | 76.92 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all BGIOSGA008091 retrocopies