Parental gene:

BGIOSGA001283

Aliases:None
Description:None
Organism:Rice subsp. indica (Oryza sativa indica)
Coordinates:1:26291477..26292870(-)


>BGIOSGA001283
ATGGCCGCTGGCGTTGACGGCGACACGGCCGCCGCCGCCGCCGCCGGAGGCGGGGTGGTGGTGGTGTTCGACTTCGACAG
GACCATCATCGAGTGGGACAGCGACGACTGGGTCATCACCAAGCTCGGCGCCTCCGACGCCTTTCGCCGCCTCCGCCCCA
CCATGCGCTGGAACCCCCTCATGGACAGGATGATGGTGGAGCTGCACGCCCAGGGGAGGTCGGCCGACGACATCCGCGAC
TGCCTCAAGAGCGCCCCCCTCGACGCCCACGTCCTCTCCGCCATCACCACGGCCTCGGCATTAGGGTGTGATTTGAGGGT
GGCGAGCGACGCCAACGCCTTCTTCATCGAGACCGTGCTGGAGCACCACGGCGTCCTCGGATGCTTCTCGGAGATCAGCA
CGAACCCGGCGCGCGTCGACGGCAACGGCAGGCTGAGGATCTCGCCGTTCCACGACCCCGACGACAGCTCGCCCCATGGA
TGCAGCCTCTGCCCCGAGAACATGTGCAAGGGCAAGATAATTGAGAGGATTCAGGCGACGGCCAATGGTAAAAGGCATTT
CATCTACATTGGTGATGGCAGAGGAGATTACTGCCCCTCCCTTAAGCTAGGGGAAGGGGACTATGTCATGCCAAAGGAGA
ATTACCCCCTCTGGAATCTCATCAGCAGCAACAAACAGCTTCTCAAGGCCGAGGTTCATCCATGGAATAATGGCGAGGAA
CTCGAACAGACCTTACTTAAGTTGGTCAACAAGTTGATCACCCCACCTGCACAACCATCCCAATTTGAATATAAATGTGA
TATGAGCAATCCAGTATCCACTGAAGTAGGACAGGCTCTTCGTGTGCCACATTAA

Species Parental gene accession Homology type Retrogenes number
Brachypodium distachyon BRADI2G42720 ortholog_one2one 1 retrogene
retro_bdis_19,
Zea mays GRMZM2G035134 ortholog_one2many 1 retrogene
retro_zmay_14,
Hordeum vulgare MLOC_52823 ortholog_one2one 1 retrogene
retro_hvul_27,
Oryza brachyantha OB01G31280 ortholog_one2one 1 retrogene
retro_obra_4,
Oryza glumaepatula OGLUM01G25430 ortholog_one2one 1 retrogene
retro_oglu_22,
Oryza meridionalis OMERI01G19970 ortholog_one2one 1 retrogene
retro_omer_22,
Oryza nivara ONIVA01G24910 ortholog_one2one 1 retrogene
retro_oniv_37,
Oryza punctata OPUNC01G21870 ortholog_one2one 1 retrogene
retro_opun_7,
Oryza rufipogon ORUFI01G24440 ortholog_one2one 1 retrogene
retro_oruf_27,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_oind_8 52.81 92.61
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Download FASTA sequences of all BGIOSGA001283 retrocopies