Parental gene: | PDC1, AT4G33070 |
| Aliases: | None |
| Description: | Pyruvate decarboxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O82647] |
| Organism: | Mouse-ear cress (Arabidopsis thaliana) |
| Coordinates: | 4:15952288..15954771(-) |
>AT4G33070
ATGGACACCAAAATCGGATCGATCGATGATTGCAAGCCGACGAACGGCGACGTCTGTAGTCCAACAAACGGCACCGTCGC
AACAATCCACAACTCTGTTCCTTCCTCCGCTATCACCATCAACTACTGCGACGCGACTCTCGGCCGTCACTTAGCTCGTC
GTCTCGTCCAAGCCGGCGTTACGGATGTTTTCTCTGTTCCCGGAGATTTCAACCTCACTTTGCTTGATCACCTCATGGCT
GAGCCGGACCTCAACCTAATCGGATGTTGTAACGAGCTAAACGCCGGTTACGCTGCCGACGGTTACGCTAGATCTCGTGG
AGTCGGCGCTTGCGTTGTTACCTTCACCGTTGGTGGACTCAGCGTTTTAAACGCGATCGCTGGTGCTTACAGCGAGAATC
TTCCTCTTATCTGTATCGTCGGAGGTCCTAACTCTAACGATTATGGCACTAACCGGATTCTTCATCACACCATTGGATTA
CCTGATTTTAGCCAAGAGCTTAGGTGCTTCCAAACGGTGACTTGTTATCAGGCGGTGGTGAACAATTTAGATGATGCTCA
TGAACAGATTGATAAAGCAATATCAACAGCTTTGAAAGAGAGCAAGCCTGTGTATATAAGTGTAAGCTGTAACTTAGCAG
CGATTCCTCATCATACATTTAGCCGTGATCCTGTCCCTTTTTCTCTAGCTCCAAGATTGAGCAACAAGATGGGTTTAGAA
GCTGCGGTGGAAGCAACATTGGAGTTTCTGAATAAGGCTGTGAAGCCAGTTATGGTTGGTGGTCCTAAGTTGCGTGTGGC
TAAAGCTTGTGATGCCTTTGTTGAGCTAGCTGATGCTTCAGGCTATGCTTTGGCGATGATGCCTTCTGCGAAAGGCTTTG
TACCAGAGCACCATCCTCATTTCATTGGAACTTATTGGGGAGCAGTGAGCACTCCTTTTTGCTCTGAGATTGTGGAATCT
GCGGATGCTTACATTTTTGCAGGTCCAATCTTCAACGACTATAGCTCTGTTGGTTACTCGCTTCTCCTCAAGAAAGAAAA
AGCCATCGTTGTGCAACCTGATCGTATCACTGTGGCCAATGGTCCTACTTTTGGTTGCATTTTGATGAGCGATTTCTTCA
GGGAATTGTCTAAGAGGGTGAAGCGTAACGAGACTGCATATGAGAACTACCATAGGATCTTTGTCCCTGAAGGTAAGCCA
TTGAAGTGTGAATCAAGAGAGCCATTGAGAGTTAACACAATGTTCCAGCACATTCAGAAGATGCTCTCTAGTGAAACCGC
TGTGATTGCTGAAACCGGTGATTCTTGGTTCAATTGCCAAAAACTAAAGCTGCCAAAAGGATGTGGGTACGAGTTTCAGA
TGCAGTATGGATCGATTGGGTGGTCTGTTGGTGCAACTCTAGGATACGCACAGGCATCACCAGAGAAGCGAGTGTTGGCA
TTCATCGGTGATGGGAGTTTCCAAGTCACGGTTCAGGACATATCAACAATGCTGCGTAATGGACAGAAGACGATCATCTT
CTTGATTAACAATGGTGGCTACACCATTGAAGTAGAGATTCATGACGGTCCTTATAACGTGATTAAGAACTGGAACTACA
CTGGTCTCGTTGACGCCATTCATAACGGTGAAGGCAATTGCTGGACTGCAAAGGTGAGATACGAAGAGGAGTTAGTGGAG
GCGATTACGACAGCGACGACGGAGAAGAAAGATTGTCTATGTTTCATAGAAGTGATTCTTCACAAGGATGATACGAGCAA
AGAGTTGCTTGAGTGGGGCTCACGCGTCTCTGCTGCTAACAGCCGTCCTCCCAATCCTCAGTAG
ATGGACACCAAAATCGGATCGATCGATGATTGCAAGCCGACGAACGGCGACGTCTGTAGTCCAACAAACGGCACCGTCGC
AACAATCCACAACTCTGTTCCTTCCTCCGCTATCACCATCAACTACTGCGACGCGACTCTCGGCCGTCACTTAGCTCGTC
GTCTCGTCCAAGCCGGCGTTACGGATGTTTTCTCTGTTCCCGGAGATTTCAACCTCACTTTGCTTGATCACCTCATGGCT
GAGCCGGACCTCAACCTAATCGGATGTTGTAACGAGCTAAACGCCGGTTACGCTGCCGACGGTTACGCTAGATCTCGTGG
AGTCGGCGCTTGCGTTGTTACCTTCACCGTTGGTGGACTCAGCGTTTTAAACGCGATCGCTGGTGCTTACAGCGAGAATC
TTCCTCTTATCTGTATCGTCGGAGGTCCTAACTCTAACGATTATGGCACTAACCGGATTCTTCATCACACCATTGGATTA
CCTGATTTTAGCCAAGAGCTTAGGTGCTTCCAAACGGTGACTTGTTATCAGGCGGTGGTGAACAATTTAGATGATGCTCA
TGAACAGATTGATAAAGCAATATCAACAGCTTTGAAAGAGAGCAAGCCTGTGTATATAAGTGTAAGCTGTAACTTAGCAG
CGATTCCTCATCATACATTTAGCCGTGATCCTGTCCCTTTTTCTCTAGCTCCAAGATTGAGCAACAAGATGGGTTTAGAA
GCTGCGGTGGAAGCAACATTGGAGTTTCTGAATAAGGCTGTGAAGCCAGTTATGGTTGGTGGTCCTAAGTTGCGTGTGGC
TAAAGCTTGTGATGCCTTTGTTGAGCTAGCTGATGCTTCAGGCTATGCTTTGGCGATGATGCCTTCTGCGAAAGGCTTTG
TACCAGAGCACCATCCTCATTTCATTGGAACTTATTGGGGAGCAGTGAGCACTCCTTTTTGCTCTGAGATTGTGGAATCT
GCGGATGCTTACATTTTTGCAGGTCCAATCTTCAACGACTATAGCTCTGTTGGTTACTCGCTTCTCCTCAAGAAAGAAAA
AGCCATCGTTGTGCAACCTGATCGTATCACTGTGGCCAATGGTCCTACTTTTGGTTGCATTTTGATGAGCGATTTCTTCA
GGGAATTGTCTAAGAGGGTGAAGCGTAACGAGACTGCATATGAGAACTACCATAGGATCTTTGTCCCTGAAGGTAAGCCA
TTGAAGTGTGAATCAAGAGAGCCATTGAGAGTTAACACAATGTTCCAGCACATTCAGAAGATGCTCTCTAGTGAAACCGC
TGTGATTGCTGAAACCGGTGATTCTTGGTTCAATTGCCAAAAACTAAAGCTGCCAAAAGGATGTGGGTACGAGTTTCAGA
TGCAGTATGGATCGATTGGGTGGTCTGTTGGTGCAACTCTAGGATACGCACAGGCATCACCAGAGAAGCGAGTGTTGGCA
TTCATCGGTGATGGGAGTTTCCAAGTCACGGTTCAGGACATATCAACAATGCTGCGTAATGGACAGAAGACGATCATCTT
CTTGATTAACAATGGTGGCTACACCATTGAAGTAGAGATTCATGACGGTCCTTATAACGTGATTAAGAACTGGAACTACA
CTGGTCTCGTTGACGCCATTCATAACGGTGAAGGCAATTGCTGGACTGCAAAGGTGAGATACGAAGAGGAGTTAGTGGAG
GCGATTACGACAGCGACGACGGAGAAGAAAGATTGTCTATGTTTCATAGAAGTGATTCTTCACAAGGATGATACGAGCAA
AGAGTTGCTTGAGTGGGGCTCACGCGTCTCTGCTGCTAACAGCCGTCCTCCCAATCCTCAGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Brassica oleracea | Bo2g001320 | ortholog_many2many | 1 retrogene | |
| Brassica rapa | Bra028896 | ortholog_one2many | 1 retrogene | |
| Arabidopsis lyrata | fgenesh2_kg.7__814__AT4G33070.1 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_atha_21 | 82.21 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all AT4G33070 retrocopies