Parental gene:

RPS15A, AT1G04270

Aliases:None
Description:40S ribosomal protein S15-1 [Source:UniProtKB/Swiss-Prot;Acc:Q08112]
Organism:Mouse-ear cress (Arabidopsis thaliana)
Coordinates:1:1141603..1143053(-)


>AT1G04270
ATGGCGGATGTTGAACCAGAGGTTGCTGCTGCTGGAGTTCCCAAGAAGAGGACGTTTAAGAAGTTTGCCTTCAAAGGAGT
TGATCTCGATGCTCTTCTCGATATGTCTACTGATGATCTTGTCAAGCTCTTCTCTTCTCGTATTCGTAGAAGGTTCTCTA
GAGGTTTGACAAGGAAGCCAATGGCTCTGATTAAGAAGCTGAGGAAAGCGAAAAGGGAGGCACCACAAGGTGAGAAGCCA
GAACCAGTGAGAACCCACTTGAGGAACATGATCATCGTCCCTGAAATGATTGGAAGCATCATTGGAGTGTACAACGGAAA
GACTTTCAACCAGGTTGAGATCAAGCCTGAGATGATTGGTCACTACCTGGCTGAGTTCTCTATCTCATACAAGCCGGTCA
AGCACGGTAGGCCTGGTGTTGGTGCTACCCACTCTTCCAGATTCATTCCCCTTAAGTGA

Species Parental gene accession Homology type Retrogenes number
Brassica oleracea Bo5g004420 ortholog_one2many 1 retrogene
retro_bole_33,
Brassica rapa Bra032519 ortholog_one2many 1 retrogene
retro_brap_20,
Arabidopsis lyrata fgenesh2_kg.1__358__AT1G04270.1 ortholog_one2one 1 retrogene
retro_alyr_8,
Medicago truncatula MTR_1g070450 ortholog_many2many 1 retrogene
retro_mtru_46,
Solanum tuberosum PGSC0003DMG400007336 ortholog_many2many 1 retrogene
retro_stub_80,
Solanum lycopersicum Solyc02g082000.2 ortholog_many2many 1 retrogene
retro_slyc_75,
Triticum aestivum Traes_2AL_52D3F9AF41 ortholog_many2many 1 retrogene
retro_taes_67,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_atha_20 63.89 92.11
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Download FASTA sequences of all AT1G04270 retrocopies