Parental gene:

Sb04g001140

Aliases:None
Description:None
Organism:Sorghum (Sorghum bicolor)
Coordinates:4:981278..985460(-)


>Sb04g001140
ATGGATCGGGTTCGCGGATCCGCGTTCCTGCTCGGCGTCCTGCTCGCAGGATCCCTGTTCGCATTTTCAGTTGCAAAGGA
GGAGACCAAGAAGCTCGGGACTGTGATCGGTATTGATCTCGGTACCACCTACTCCTGTGTTGGTGTGTACAAGAATGGTC
ATGTCGAGATCATCGCCAATGACCAGGGTAACCGTATCACACCCTCATGGGTTGCCTTCACTGATAGCGAGAGGCTCATC
GGTGAGGCTGCCAAGAACCAGGCAGCCGTGAACCCTGAGAGGACCATCTTTGACGTCAAGCGTCTCATTGGAAGAAAGTT
TGAGGACAAGGAAGTCCAGAGGGACATGAAACTTGTTCCCTACAAGATAATTAACAAGGATGGCAAGCCGTACATTCAGG
TCAAGATCAAGGACGGGGAGAATAAGGTCTTCAGCCCTGAGGAGATCAGTGCCATGATTCTTGGCAAGATGAAGGATACC
GCTGAGGCGTACCTTGGCAAGAAGATCAACGATGCTGTCGTCACTGTCCCTGCGTACTTCAATGATGCGCAGAGGCAGGC
AACCAAGGATGCTGGTGTCATTGCCGGCCTCAATGTTGCTAGGATCATCAATGAGCCAACTGCTGCTGCTATTGCCTACG
GTTTGGACAAGAAGGGTGGGGAGAAGAACATCCTTGTCTTTGACCTTGGTGGTGGTACTTTTGATGTCAGTATCTTGACC
ATTGACAACGGTGTCTTTGAGGTGCTGGCCACCAACGGTGACACCCATCTTGGAGGTGAGGACTTTGACCAGAGGATCAT
GGAGTACTTCATCAAGTTGATCAAGAAGAAGTACAGCAAGGACATCAGCAAGGACAACCGTGCTCTTGGAAAGCTGAGGA
GGGAAGCTGAGCGTGCCAAGAGGGCTCTCAGCAACCAGCACCAGGTCCGTGTTGAGATCGAGTCCCTCTTTGATGGGACC
GATTTCTCGGAGCCGCTGACCCGTGCCAGGTTTGAGGAGCTGAACAACGACCTGTTCCGCAAGACCATGGGCCCTGTCAA
GAAGGCCATGGAGGATGCTGGCCTTCAGAAGAGCCAGATCCATGAGATTGTCCTGGTTGGTGGAAGCACCAGGATTCCCA
AGGTCCAGCAGCTCCTGAGGGACTACTTTGATGGCAAGGAGCCCAACAAGGGTGTCAACCCTGATGAGGCTGTTGCCTTT
GGTGCCGCAGTGCAGGGAAGCATCTTGAGCGGCGAGGGTGGTGATGAGACCAAAGATATCCTCCTCCTTGATGTGGCACC
CCTCACCTTGGGTATTGAGACCGTCGGTGGAGTCATGACCAAGTTGATCCCGAGGAACACAGTCATCCCAACCAAGAAGT
CGCAGGTGTTCACCACCTACCAGGACCAGCAGACCACTGTCTCCATCCAGGTCTTCGAGGGTGAGCGCAGCATGACCAAG
GACTGCCGTCTTCTCGGCAAGTTCGACCTCTCTGGCATTCCACCAGCTCCAAGGGGCACTCCCCAGATCGAGGTGACCTT
CGAGGTGGACGCCAACGGTATCCTGAACGTGAAGGCGGAGGACAAGGGCACCGGCAAGTCAGAGAAGATCACCATCACCA
ACGAGAAGGGCCGTCTGAGCCAGGAGGAGATCGACCGCATGGTGAAGGAGGCGGAGGAGTTCGCTGAGGAGGACAAGAAG
GTGAAGGAGCGGATCGACGCCCGGAACCAGCTGGAGACGTACGTGTACAACATGAAGAACACGGTGGGCGACAAGGACAA
GCTCGCCGACAAGCTGGAGGCCGAGGAGAAGGAGAAGGTGGAGGAGGCCCTCAAGGAGGCGCTGGAGTGGCTGGACGACA
ACCAGTCGGCCGAGAAGGACGAGTACGTGGAGAAGCTCAAGGAGGTGGAGGCCGTCTGCAACCCCATCGTCTCGGCCGTG
TACCAGCGGTCCGGCGGCGCCCCCGGCGGTGGTGATGACTCGGAGGGTGGCGTCGACGACGACCACGACGAGCTGTA

Species Parental gene accession Homology type Retrogenes number
Brachypodium distachyon BRADI3G01477 ortholog_one2one 1 retrogene
retro_bdis_30,
Aegilops tauschii F775_27431 ortholog_one2one 1 retrogene
retro_atau_11,
Oryza longistaminata KN538684.1_FG046 ortholog_one2one 1 retrogene
retro_olon_13,
Hordeum vulgare MLOC_55999 ortholog_one2one 1 retrogene
retro_hvul_1,
Oryza nivara ONIVA01G37420 ortholog_one2one 1 retrogene
retro_oniv_8,
Oryza rufipogon ORUFI02G01160 ortholog_one2one 1 retrogene
retro_oruf_18,
Triticum aestivum Traes_6DS_A593093E1 ortholog_one2one 1 retrogene
retro_taes_72,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sbic_39 76.34 95.19
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Download FASTA sequences of all Sb04g001140 retrocopies