Common name: Sorghum
Latin name: Sorghum bicolor
Genome assembly: Sorbi1
All retrocopies: 52
Parental genes: 52

Summary: Number of retrocopies :
Conserved ORF: 49 ORF 3 ORF

# RetrogeneDB ID Identity Coverage ORF conservation
1. retro_sbic_1 58.56 % 82.09 % ORF
2. retro_sbic_2 56.64 % 93.36 % ORF
3. retro_sbic_3 59.66 % 98.29 % ORF
4. retro_sbic_4 56.21 % 100.00 % ORF
5. retro_sbic_5 62.96 % 94.41 % ORF
6. retro_sbic_6 69.52 % 99.05 % ORF
7. retro_sbic_7 81.51 % 84.22 % ORF
8. retro_sbic_8 62.87 % 92.74 % ORF
9. retro_sbic_9 66.67 % 51.76 % ORF
10. retro_sbic_10 84.95 % 94.69 % ORF
11. retro_sbic_11 52.60 % 59.72 % ORF
12. retro_sbic_12 56.10 % 91.01 % ORF
13. retro_sbic_13 54.04 % 86.43 % ORF
14. retro_sbic_14 55.61 % 86.33 % ORF
15. retro_sbic_15 61.07 % 51.74 % ORF
16. retro_sbic_16 56.62 % 95.47 % ORF
17. retro_sbic_17 73.24 % 90.96 % ORF
18. retro_sbic_18 56.10 % 56.70 % ORF
19. retro_sbic_19 59.63 % 55.18 % ORF
20. retro_sbic_20 72.83 % 85.08 % ORF
21. retro_sbic_21 60.29 % 88.46 % ORF
22. retro_sbic_22 56.36 % 100.00 % ORF
23. retro_sbic_23 56.33 % 57.06 % ORF
24. retro_sbic_24 68.06 % 97.76 % ORF
25. retro_sbic_25 61.92 % 78.31 % ORF
26. retro_sbic_26 80.11 % 98.34 % ORF
27. retro_sbic_27 57.97 % 94.31 % ORF
28. retro_sbic_28 57.75 % 64.09 % ORF
29. retro_sbic_29 64.93 % 89.84 % ORF
30. retro_sbic_30 81.08 % 99.11 % ORF
31. retro_sbic_31 65.88 % 89.96 % ORF
32. retro_sbic_32 52.64 % 63.13 % ORF
33. retro_sbic_33 66.13 % 97.03 % ORF
34. retro_sbic_34 52.55 % 96.48 % ORF
35. retro_sbic_35 50.74 % 63.46 % ORF
36. retro_sbic_36 83.69 % 100.00 % ORF
37. retro_sbic_37 98.10 % 62.96 % ORF
38. retro_sbic_38 98.82 % 100.00 % ORF
39. retro_sbic_39 76.34 % 95.19 % ORF
40. retro_sbic_40 87.54 % 67.08 % ORF
41. retro_sbic_41 65.58 % 52.87 % ORF
42. retro_sbic_42 71.59 % 87.16 % ORF
43. retro_sbic_43 85.89 % 50.80 % ORF
44. retro_sbic_44 50.33 % 76.19 % ORF
45. retro_sbic_45 78.87 % 90.41 % ORF
46. retro_sbic_46 67.13 % 57.69 % ORF
47. retro_sbic_47 74.17 % 100.00 % ORF
48. retro_sbic_48 64.00 % 75.28 % ORF
49. retro_sbic_52 72.22 % 58.44 % ORF
50. retro_sbic_57 78.41 % 52.10 % ORF
51. retro_sbic_58 85.99 % 78.46 % ORF
52. retro_sbic_60 54.40 % 82.19 % ORF
# Ensembl ID Symbol Description
1. Sb01g038100 CASP-like protein 4B1 [Source:UniProtKB/Swiss-Prot;Acc:C5WNF5]
2. Sb10g006910
3. Sb09g003710
4. Sb09g029240
5. Sb02g031020
6. Sb02g042765
7. Sb01g050330
8. Sb04g001140
9. Sb04g025300
10. Sb01g029510
11. Sb01g034640
12. Sb10g005550
13. Sb07g014940
14. Sb03g042360
15. Sb04g008010
16. Sb08g003070
17. Sb06g004530
18. Sb04g007470
19. Sb06g022880
20. Sb01g032670 zinc transporter 11 precursor [Source:Projected from Arabidopsis thaliana (AT1G55910) TAIR;Acc:AT1G55910]
21. Sb01g046840
22. Sb03g030950
23. Sb06g033470 Casparian strip membrane protein 1 [Source:UniProtKB/Swiss-Prot;Acc:C5YAP3]
24. Sb04g028050
25. Sb06g026100
26. Sb03g028430
27. Sb04g029750
28. Sb10g005250 Vaculor H+-pyrophosphatase [source:UniProtKB/TrEMBL;Acc:D9IG65_SORBI]
29. Sb06g022840
30. Sb03g006420
31. Sb01g007640
32. Sb03g038160
33. Sb01g039890
34. Sb07g001620
35. Sb02g024090
36. Sb06g023650
37. Sb03g026950
38. Sb06g027670
39. Sb07g006050
40. Sb10g000770
41. Sb02g025100
42. Sb03g029810
43. Sb09g020710
44. Sb01g020910
45. Sb10g022090
46. Sb01g037140
47. Sb01g047500
48. Sb02g027810
49. Sb10g003710
50. Sb04g022460
51. Sb02g042320
52. Sb05g001215
Retrogenes FASTA BED
TSV (download all or selected columns from MySQL table)
Parental genes FASTA BED
TSV (download all or selected columns from MySQL table)