Parental gene:

PP1S194_18V6

Aliases:None
Description:Predicted protein [Source:UniProtKB/TrEMBL;Acc:A9TAL6]
Organism:Moss (Physcomitrella patens)
Coordinates:DS545083.1:87914..89987(+)


>PP1S194_18V6
ATGGCGACGTATTCGGGCCTTACGCACAAGCAAACGGCGCCCCTGGTGCACATCCTGGGGATCGTCAGCATAGTGCTGGT
TATCATCTGGACGTATCATTACAGGGGCGGCTATGGACTCTCCGGAGGCCCTGTGTTTAATGTTCACCCTTTGCTCATGA
TTGCGGGGTTCATCTTTTTGTCAAGCCAAGCCATAATCTCTTACAAGACTGTCAGTGGAGACAGAACCTATCAGAAGGCC
GTGCACATGACTCTTCAGGGAGTCGCACTTCTGCTGGGCATTGTGGGCATCTTGGCTGCATACAAGTTCCACTCTGACCT
CAAGATTCAAAACTTCTACAGTCTACATTCCTGGTTTGGAATCATCACGATTTTGCTCTACCTCTTGCAGTGGATCCTTG
GGTTCGTATCCTTCTGGACCCAAAGTTTGTCTTCTTCGACGCGTGCTGAGCTTCTTCCCTGGCATATCTTCCTGGGGCTG
GGTGCTTTTGTAACAGCTCTTGCTACCGCCGAGCTCGGATTGCTGGAGAAGCTCACTTTTCTTCAGAAGGGAGCTCCATT
TGTGGGCCTCTGGGCTCGAGAAGCGATGCTCGTGAACTCCATCGGGATCTCGGTGTTGCTGTTCGGCATGGTGGTGGTCT
TGACAGCGGTAATGCCGAACCCCCGCCGACACGAGGGCTACAGTCCCCTAGAGTAA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA005956 ortholog_many2many 1 retrogene
retro_oind_56,
Zea mays GRMZM2G034668 ortholog_many2many 1 retrogene
retro_zmay_23,
Leersia perrieri LPERR04G16060 ortholog_many2many 1 retrogene
retro_lper_17,
Hordeum vulgare MLOC_12641 ortholog_many2many 1 retrogene
retro_hvul_22,
Oryza brachyantha OB02G32980 ortholog_many2many 1 retrogene
retro_obra_5,
Oryza barthii OBART02G25610 ortholog_many2many 1 retrogene
retro_obar_22,
Oryza glumaepatula OGLUM02G26140 ortholog_many2many 1 retrogene
retro_oglu_26,
Oryza nivara ONIVA02G28050 ortholog_many2many 1 retrogene
retro_oniv_34,
Oryza punctata OPUNC02G23460 ortholog_many2many 1 retrogene
retro_opun_42,
Oryza rufipogon ORUFI02G27020 ortholog_many2many 1 retrogene
retro_oruf_43,
Oryza sativa japonica OS04G0533500 ortholog_many2many 1 retrogene
retro_osat_39,
Sorghum bicolor Sb06g023650 ortholog_many2many 1 retrogene
retro_sbic_21,
Setaria italica Si010957m.g ortholog_many2many 1 retrogene
retro_sita_34,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ppat_14 63.64 99.57
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Download FASTA sequences of all PP1S194_18V6 retrocopies