Parental gene: | ENSVPAG00000003865 |
| Aliases: | None |
| Description: | None |
| Organism: | Alpaca (Vicugna pacos) |
| Coordinates: | scaffold_3316:29814..41549(-) |
>ENSVPAG00000003865
GAGCGTGCTTTGGACACCATGAATTTTGATGTTATAAAGGGCAAGCCAGTACGCATCATGTGGTCTCAGCGTGATCCATC
ACTTCGCAAAAGTGGAGTGGGCAACATATTCATTAAAAATTTGGACAAATCTATTGATAACAAAGCACTGTATGATACAT
TTTCTGCTTTTGGTAACATCCTTTCATGTAAGGTGGTTTGTGATGAAAATGGTTCCAAGGGTTATGGATTTGTGCATTTT
GAGACACAAGAAGCAGCTGAAAGAGCTATTGAAAAAATGAATGGGATGCTTCTAAATGATCGCAAAGTATTTGTTGGACG
ATTTAAGTCTCGTAAAGAACGAGAAGCAGAACTTGGAGCTAGGGCAAAAGAGTTCACCAATGTTTACATCAAGAATTTTG
GAGAAGACATGGATGATGAGCGCCTTAAGGATCTCTTTGGCAAGTTTGGACCTGCCTTAAGTGTGAAAGTAATGACTGAT
GAGAGTGGAAAATCCAAAGGTTTTGGATTTGTAAGCTTTGAAAGGCATGAAGATGCACAGAAAGCTGTGGATGAGATGAA
TGGAAAGGAGCTCAATGGAAAACAAATTTATGTTGGTCGAGCCCAGAAAAAAGTGGAACGGCAGACGGAACTTAAGCGCA
AATTTGAACAGATGAAGCAAGATAGGATCACCAGATACCAGGGTGTTAACCTTTATGTGAAAAATCTTGATGATGGTATT
GATGATGAACGTCTCCGGAAAGAGTTTTCTCCGTTTGGTACAATCACTAGTGCAAAGGTTATGATGGAGGGTGGTCGCAG
CAAAGGTTTTGGTTTTGTATGTTTCTCCTCCCCAGAAGAAGCCACTAAAGCAGTTACAGAAATGAATGGTAGAATTGTGG
CCACCAAGCCATTGTATGTAGCTTTAGCTCAGCGCAAAGAAGAGCGCCAGGCTCACCTCACTAACCAATATATGCAGAGA
ATGGCGAGTGTAAGAGCTGTGCCCAACCCCGTAATCAACCCCTACCAGCCAGCACCTCCTTCAGGTTACTTCATGGCAGC
TATCCCACAGACTCAGAACCGTGCTGCATACTATCCTCCTAGCCAAATTGCTCAACTAAGACCAAGTCCTCGCTGGACTG
CTCAGGGTGCCAGACCTCATCCATTCCAAAATATGCCCGGTGCTATCCGCCCAGCCGCTCCTAGACCACCATTTAGTACT
ATGAGACCAGCTTCTTCACAGGTTCCACGAGTCATGTCGACACAGCGTGTTGCTAACACATCAACACAGACGATGGGTCC
ACGTCCTGCAGCTGCTGCCGCTGCAGCTACTCCTGCTGTTCGCACAGTTCCGCAGTATAAATACGCTGCGGGCGTCCGCA
ATCCTCAGCAGCATCTTAATGCACAGCCACAGGTCACCATGCAGCAGCCTGCTGTTCATGTACAAGGTCAGGAGCCTTTG
ACTGCTTCCATGTTGGCATCTGCCCCTCCGCAAGAGCAGAAGCAAATGTTGGGTGAACGGCTCTTCCCTCTAATTCAAGC
CATGCACCCTTCTCTTGCTGGTAAAATCACTGGCATGTTGTTGGAGATTGATAATTCAGAACTTCTTCATATGCTCGAGT
CTCCAGAGTCTCTCCGTTCTAAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000015833 | ortholog_one2one | 5 retrogenes | |
| Homo sapiens | ENSG00000070756 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017786 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000006222 | ortholog_one2many | 4 retrogenes | |
| Mus musculus | ENSMUSG00000022283 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000003142 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000004354 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018790 | possible_ortholog | 3 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000016640 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000008639 | ortholog_one2one | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000011267 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000006063 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000004689 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_vpac_14 | 64.50 | 56.56 | Please wait, loading  |
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| 2. | retro_vpac_384 | 83.68 | 52.68 | Please wait, loading |
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| 3. | retro_vpac_620 | 68.01 | 50.28 | Please wait, loading |
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| 4. | retro_vpac_649 | 94.58 | 54.53 | Please wait, loading |
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Download FASTA sequences of all ENSVPAG00000003865 retrocopies