Parental gene:

MRPS36, ENSTBEG00000012048

Aliases:None
Description:mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:16631]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_3030:292366..308961(+)


>ENSTBEG00000012048
ATGATGGGCAGCAAGATGGCGTCTGCCAGCAGGGTCGTGCAGGTAGTGAAGCCACATACACCATTAATAAGGTTTCCTGA
CAGAAGAGATAATCCTAAACCCAATGTATCAGAAGCTTTGAGGTCAGCAGGGCTGCCATCCCATTCTTCTGCAGTTTCAC
AGCATTCTAAGGGAAGTAAATCACCAGATTTGCTGATGTATCAGGGTCCACCAGACACGGCAGAAATAATAAAAACTTTA
CCTCAGAAATACAGAAGGAAACTGGTGTCTCAAGAAGAAATGGAATTTATCCAACGTGGTGGTCCAGAGTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003161 ortholog_one2one 2 retrogenes
retro_amel_1838, retro_amel_565,
Callithrix jacchus ENSCJAG00000016092 ortholog_one2many 2 retrogenes
retro_cjac_3202, retro_cjac_45,
Dipodomys ordii ENSDORG00000007063 ortholog_one2many 1 retrogene
retro_dord_110,
Echinops telfairi ENSETEG00000019493 ortholog_one2one 2 retrogenes
retro_etel_1624, retro_etel_625,
Felis catus ENSFCAG00000031782 ortholog_one2one 1 retrogene
retro_fcat_724,
Homo sapiens ENSG00000134056 ortholog_one2one 2 retrogenes
retro_hsap_2750, retro_hsap_823,
Loxodonta africana ENSLAFG00000007932 ortholog_one2one 2 retrogenes
retro_lafr_1243, retro_lafr_598,
Monodelphis domestica ENSMODG00000019701 ortholog_one2one 1 retrogene
retro_mdom_1559,
Mus musculus ENSMUSG00000061474 ortholog_one2many 4 retrogenes
retro_mmus_105, retro_mmus_123, retro_mmus_3223, retro_mmus_753,
Nomascus leucogenys ENSNLEG00000004071 ortholog_one2one 4 retrogenes
retro_nleu_1545, retro_nleu_196, retro_nleu_2243, retro_nleu_257,
Oryctolagus cuniculus ENSOCUG00000005261 ortholog_one2one 2 retrogenes
retro_ocun_1057, retro_ocun_1109,
Otolemur garnettii ENSOGAG00000024260 ortholog_one2one 9 retrogenes
retro_ogar_1166, retro_ogar_1716, retro_ogar_2238, retro_ogar_2363, retro_ogar_2629, retro_ogar_3382, retro_ogar_711, retro_ogar_790, retro_ogar_869,
Ochotona princeps ENSOPRG00000011392 ortholog_one2one 1 retrogene
retro_opri_587,
Pongo abelii ENSPPYG00000015524 ortholog_one2one 3 retrogenes
retro_pabe_2219, retro_pabe_735, retro_pabe_917,
Pan troglodytes ENSPTRG00000016944 ortholog_one2one 4 retrogenes
retro_ptro_1858, retro_ptro_2038, retro_ptro_573, retro_ptro_690,
Pteropus vampyrus ENSPVAG00000010843 ortholog_one2one 1 retrogene
retro_pvam_174,
Rattus norvegicus ENSRNOG00000048862 ortholog_one2many 2 retrogenes
retro_rnor_1792, retro_rnor_2014,
Ictidomys tridecemlineatus ENSSTOG00000021863 ortholog_one2one 2 retrogenes
retro_itri_1039, retro_itri_938,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_224 62.34 74.76
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2. retro_tbel_359 81.90 100.00
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3. retro_tbel_702 90.48 100.00
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4. retro_tbel_1313 80.58 100.00
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5. retro_tbel_1494 91.67 69.90
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6. retro_tbel_1527 75.24 100.00
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7. retro_tbel_2404 86.21 84.47
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8. retro_tbel_2661 78.43 98.06
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9. retro_tbel_2755 89.06 61.17
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10. retro_tbel_2762 82.72 78.64
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11. retro_tbel_2924 94.12 82.52
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12. retro_tbel_2934 75.73 100.00
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13. retro_tbel_3239 99.01 98.06
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14. retro_tbel_3240 99.03 100.00
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15. retro_tbel_3891 75.24 100.00
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16. retro_tbel_3893 96.04 98.06
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17. retro_tbel_3941 92.31 100.00
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18. retro_tbel_4124 76.27 55.34
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19. retro_tbel_4429 96.12 100.00
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20. retro_tbel_4515 92.23 100.00
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21. retro_tbel_4543 73.58 100.00
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22. retro_tbel_4592 76.92 100.00
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Download FASTA sequences of all ENSTBEG00000012048 retrocopies