Parental gene:

HNRNPK, ENSTBEG00000001289

Aliases:None
Description:heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:5044]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_3965:47566..55453(-)


>ENSTBEG00000001289
ATGGAAACCGAACAGCCAGAGGAAACCTTCCCCAACACTGAAACAAATGGTGAATTTGGTAAACGCCCAGCAGAAGACAT
GGAAGAGGAGCAAGCATTTAAAAGATCTAGGAACACTGATGAGATGGTTGAATTACGCATTCTGCTTCAGAGCAAGAATG
CTGGGGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTGCGAACAGACNNNAATGCCAGTGTTTCAGTCCCAGAC
AGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCTGATATTGAAACAATTGGAGAAATTCTGAAGAAAATCATCCCTAC
CTTGGAAGAGGGCCTGCAGTTGCCATCACCCACTGCAACCAGCCAGCTCCCGCTCGAATCTGATGCTGTGGAATGCTTAA
ATTACCAACACTATAAAGGAAGCGACTTCGACTGCGAGTTGAGACTGTTGATTCATCAGAGTTTGGCAGGAGGAATTATT
GGGGTCAAAGGTGCTAAAATCAAAGAACTTCGAGAGAACACTCAGACAACAATCAAGCTTTTCCAGGAATGCTGTCCTCA
TTCCACTGACAGAGTTGTTCTTATTGGAGGAAAGCCTGATAGAGTTGTAGAGTGTATAAAGATCATCCTTGATCTTATAT
CTGAGTCTCCTATCAAAGGACGTGCACAGCCTTATGATCCCAATTTTTATGATGAAACCTATGATTATGGTGGTTTTACC
ATGATGTTTGATGACCGCCGTGGACGTCCTGTGGGATTTCCCATGCGGGGGAGAGGTGGTTTTGACAGAATGCCTCCTGG
TCGGGGTGGACGTCCCATGCCTCCGTCTAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCTCCTCCTCCTCCTC
CTGGACGAGGGGGCCGGGGCGGTAGCAGAGCTCGGAATCTTCCTCTCCCTCCACCACCACCACCTAGAGGAGGAGATTTA
ATGGCTTACGACAGAAGAGGAAGACCTGGGGACCGTTACGATGGCATGGTTGGCTTCAGTGCTGATGAAACTTGGGATTC
TGCAATAGATACATGGAGCCCATCCGAATGGCAGATGGCTTATGAACCTCAGNNNNNNNNNNNNNNNNATTATTCCTATG
CAGGGGGTCGTGGATCATATGGTGATCCTGGTGGACCTATTATTACTACACAAGTAACTATTCCCAAAGATTTGGCTGGT
TCTATTATTGGCAAAAAAGGTCAGCGAATTAAACAAATTCATCATCAATCAGGAGCTTCAATCAAAATTGATGAGCCTTT
AGAAGGCTCCGAAGATCGGATCATTACCATTACAGGAACACAGGACCAGATACAGAATGCACAGTATTTGCTGCACAACA
GTGTGAAGCAGTATGCAGATGTTGAAGGATTCTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021131 ortholog_one2one 2 retrogenes
retro_btau_468, retro_btau_605,
Homo sapiens ENSG00000165119 ortholog_one2one 3 retrogenes
retro_hsap_2323, retro_hsap_2674, retro_hsap_3385,
Microcebus murinus ENSMICG00000015780 ortholog_one2one 3 retrogenes
retro_mmur_1562, retro_mmur_235, retro_mmur_448,
Myotis lucifugus ENSMLUG00000005871 ortholog_one2one 2 retrogenes
retro_mluc_128, retro_mluc_561,
Macaca mulatta ENSMMUG00000018871 possible_ortholog 1 retrogene
retro_mmul_2111,
Monodelphis domestica ENSMODG00000008402 possible_ortholog 1 retrogene
retro_mdom_1666,
Mus musculus ENSMUSG00000021546 ortholog_one2one 2 retrogenes
retro_mmus_1131, retro_mmus_2137,
Otolemur garnettii ENSOGAG00000007478 possible_ortholog 3 retrogenes
retro_ogar_2635, retro_ogar_2966, retro_ogar_3086,
Pongo abelii ENSPPYG00000019327 ortholog_one2one 3 retrogenes
retro_pabe_2105, retro_pabe_2106, retro_pabe_42,
Sarcophilus harrisii ENSSHAG00000017109 possible_ortholog 1 retrogene
retro_shar_820,
Tursiops truncatus ENSTTRG00000004906 ortholog_one2many 1 retrogene
retro_ttru_1622,
Tursiops truncatus ENSTTRG00000016693 ortholog_one2many 7 retrogenes
retro_ttru_1144, retro_ttru_180, retro_ttru_1922, retro_ttru_444, retro_ttru_813, retro_ttru_930, retro_ttru_937,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_2491 89.68 81.03
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Download FASTA sequences of all ENSTBEG00000001289 retrocopies