Parental gene:

NDE1, ENSSTOG00000019896

Aliases:None
Description:nudE nuclear distribution E homolog 1 (A. nidulans) [Source:HGNC Symbol;Acc:17619]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393311.1:3201782..3220674(+)


>ENSSTOG00000019896
ATGGAAGACTCGGGAAAGACTTTTGGCTCCGAGGAGGAAGAAGCGAGCTACTGGAAAGATCTGGCAATGACCTACAAGCA
GAGGGCAGAGAATACGCAGGAGGAACTTCGAGAATTCCAAGAGGGAAGCCGAGAATATGAAGCTGAGTTGGAGACACAGC
TGCAACAGATCGAGTCCAGGAACCGGGACCTGTTGTCGGAGAACAACCGCCTTCGCTTGGAGCTGGAGACAGTCAAGGAG
AAGTTTGAGCTGCAGCACTCTGAGGGCTACCGGCAGATCTCCGCCTTAGAGGATGACCTGGCGCAGACCAGAGCCATTAG
AGATCAGCTGCAGAAGTACATCCGGGAGCTGGAGCAGGCCAACGACGACCTGGAAAGAGCAAAACGAGCCACGATCATGT
CTCTGGAAGACTTTGAGCAGCGCCTGAATCAAGCCATTGAGAGAAATGCCTTCTTGGAAAGTGAACTTGATGAGAAGGAG
AACCTTCTAGAGTCCGTCCAGCGGCTGAAGGACGAAGCCAGAGATTTGCGGCAGGAGCTGGCTGTGCAGCAGAAGCAGGA
GAAGCCCAGGACGCCCATGCCCAGCTCGGCAGAAGCTGAGAGGACGGACACAGCTGTGCAGGCCACGGGCTCCGTGCCGT
CCACGCCCGTAGCACATCGAGGACCCAGCTCCAGCCTAAACACACCGGGGACGTTCAAACGTGGTCTGGACCACTCCAAC
AGTGGGACCCCCCTCACACCTGCAGCCCGGATTTCAGCCCTCAACATTGTGGGGGACCTGCTTCGGAAAGTAGGGGCTCT
GGAGTCCAAACTCGCCTCCTGCCGGAACTTCGTGTATGACCAGTCCCCAAACCGGACAGGCGGCCCTGCCTCAGGGCGGG
GGAGCAAGAACAGAGACGGCGGGGACAGACGGACCAGCAGCAGCGGCGGACCTCTGAGTGATAAAGGGTTGGGAAAACGT
CTGGACCTCGGGAAGCCACCCTCACGGTCCTCCTCGCCGCCGCCGCCCGCCCCGGGGGTGGTCAAGCTGTTGTTCTAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009557 ortholog_one2many 1 retrogene
retro_amel_104,
Canis familiaris ENSCAFG00000018722 ortholog_one2one 1 retrogene
retro_cfam_1579,
Choloepus hoffmanni ENSCHOG00000006004 ortholog_one2one 1 retrogene
retro_chof_1270,
Cavia porcellus ENSCPOG00000019614 ortholog_one2one 2 retrogenes
retro_cpor_875, retro_cpor_876,
Ictidomys tridecemlineatus ENSSTOG00000027930 within_species_paralog 1 retrogene
retro_itri_620,
Tupaia belangeri ENSTBEG00000005260 ortholog_one2one 1 retrogene
retro_tbel_1468,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_1101 72.46 59.42
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Download FASTA sequences of all ENSSTOG00000019896 retrocopies