Parental gene:

METTL9, ENSSSCG00000030373

Aliases:None
Description:methyltransferase like 9 [Source:HGNC Symbol;Acc:24586]
Organism:Pig (Sus scrofa)
Coordinates:3:24135637..24172328(+)


>ENSSSCG00000030373
AACCATGAGTGGTATGTGTGCAACAGAGAGAAATTATGTGAATCACTCCAGGCTGTCTTTGTTCAGAGTTACCTTGATCA
AGGAACACAGATCTTCTTAAACAACAGCATTGAGAAATCGGGCTGGCTATTTATCCAATTATATCATTCTTTTGTGTCAT
CTGTTTTTAGCCTGTTTATGTCTAGAACATCTATCAATGGGTTGCTAGGAAGAGGCTCAATGTTTGTGTTTTCACCAGAT
CAGTTTCAGAGACTGCTTAAAATTAATCCAGATTGGAAAACCCATAGACTCCTTGATTTAGGTGCTGGAGATGGCGAAGT
CACAAAAATCATGAGCCCTCATTTTGAAGAAATTTATGCCACCGAGCTGTCAGAAACGATGATATGGCAGCTTCAGAAGA
AGAAATACAGAGTGCTGGGTATAAATGAGTGGCAGAATACAGGGTTCCAGTATGATGTCATCAGCTGCTTGAATTTGCTG
GACCGCTGTGATCAGCCCCTGACTTTGCTGAAAGATATCAGAAGTGTCTTGGAGCCAACCCGAGGCAGGGTCATCCTTGC
TCTGGTTTTACCCTTTCATCCGTATGTGGAAAACGTAGGTGGCAAGTGGGATAAACCATCCGAAATTTTGGAAATCAAGG
GACAGAACTGGGAAGAGCAAGTGAACAGTCTGCCTGAGGTTTTCAGAAAAGCTGGGTTTGTCATCGAAGCGTTCACCAGA
CTGCCATACCTGTGTGAAGGCGACATGTACAATGACTACTACGTTTTGGACGACGCTGTCTTTGTCCTCAAACCAGTATA
A

Library Parental gene expression (RPM)
SRP014902_placenta 29 .07 RPM
SRP014902_testis 50 .92 RPM
SRP018288_heart 43 .56 RPM
SRP018288_kidney 54 .87 RPM
SRP018288_liver 7 .52 RPM
SRP018288_lung 39 .30 RPM
SRP018856_adipose 36 .12 RPM
SRP035408_brain 77 .24 RPM
SRP035408_liver 16 .59 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003533 ortholog_one2one 2 retrogenes
retro_amel_402, retro_amel_704,
Canis familiaris ENSCAFG00000017710 ortholog_one2one 1 retrogene
retro_cfam_1875,
Callithrix jacchus ENSCJAG00000020564 possible_ortholog 1 retrogene
retro_cjac_4083,
Mustela putorius furo ENSMPUG00000016801 ortholog_one2one 2 retrogenes
retro_mputfur_1323, retro_mputfur_1610,
Rattus norvegicus ENSRNOG00000025940 ortholog_one2one 1 retrogene
retro_rnor_2623,
Tupaia belangeri ENSTBEG00000003816 ortholog_one2one 2 retrogenes
retro_tbel_1726, retro_tbel_2084,
Tursiops truncatus ENSTTRG00000015624 ortholog_one2one 4 retrogenes
retro_ttru_1100, retro_ttru_1466, retro_ttru_163, retro_ttru_467,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_441 82.14 72.93
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Download FASTA sequences of all ENSSSCG00000030373 retrocopies