Parental gene:

ZNF259, ENSSSCG00000015066

Aliases:None
Description:zinc finger protein 259 [Source:HGNC Symbol;Acc:13051]
Organism:Pig (Sus scrofa)
Coordinates:9:49241229..49250598(-)


>ENSSSCG00000015066
ATGGCGGCCAGCGGGGCTGTGGAGGCCGGGCCCCCGGGGGCTGCCGCCGCCCCCTCGTCCGCCCCGGCGCGGGACCACTT
GTTCCGGCCTATCAGCGCCGAAGATGAGGAGCTGCAACCCACAGAGATCGAGTCGCTGTGCATGAACTGCTACCGCAACG
GCATGACGCGCCTCCTCCTCACCAAGATCCCCTTCTTCAGAGAAATAATCGTGAGCTCCTTCTCCTGCGAGCACTGTGGC
TGGAACAACACGGAGATTCAGTCGGCCGGCCGGATCCAGGACCAAGGAGTGCGCTACACTTTGACCGTCAGGGCTCAGGA
GGACATGAACAGAGAAGTAGTGAAGACTGACTCTGCCACCACAAGGATCCCAGAGCTGGATTTTGAAATTCCTGCCTTCA
GCCAAAAAGGAGCTCTGACCACTGTTGAAGGATTGATCAGCCGAGCTATCTCTGGCCTGGAGCAGGATCAGCCCACACGA
AGGACAGGTGGCGACTCCCTGTTGGATATGATTGTGCGTGGCACAGAGGGGGGACATAAGGTCTACTCTCCTTTCACCCT
GGTCATTGATGATCCTTCAGGGAACAGCTTTGTGGAAAACCCACACGCTCCCCAGAAAGATGAATCCCTGGAGATCACAC
GCTATAGTCGGACTCTACAGCAGGAAGAGATGCTGGGCCTCCGGGCAGGGGCACCAGAAGAGAAGCCAGAAGAGGAGGAT
TTCAGAAAGGAAGTGCTGCAGTTCAACACTAACTGCCCGGAATGCAATGCCCCGGCCCAGACCAACATGAAGCTAGTTCA
AATCCCCCACTTTAAGGAGGTTATCATCATGGCTACCAACTGCGAGAATTGTGGCCATCGGACCAATGAGGTGAAATCTG
GAGGAGCCATAGAGCCCTTGGGCACCAGGATCACCTTCCACATCACAGATCCCTCAGATATGACCAGAGACCTGCTCAAG
TCTGAGACATGTAGTGTGGAAATTCCAGAGCTGGAATTTGAACTGGGAATGGCTGTCCTTGGGGGCAAGTTCACCACACT
GGAGGGGATGCTGAACGACATCCGGGAACTGGTGACCAAGAACCCTTTCACACTGGGTGACAGTTCTAATCCCGGCCAGG
CGGCAAAACTGCAGGAGTTTAGCCAGAAGTTGGATCAGATCCTTGAGGGTAACATGAAGGCCCACTTTATTATGGACGAT
CCAGCAGGAAACAGCTATTTGCAGAATGTGTATGCACCTGAAGATGATCCTGAGATGAAGGTAGAGCAGTATAAGCGCAC
ATTTGACCAAAACGAGGAGCTGGGGCTCAACGACATGAAGACAGAAGGCTATGAGACAGGCCTGGCTGCCCAGCGGTAG

Library Parental gene expression (RPM)
SRP014902_placenta 26 .02 RPM
SRP014902_testis 77 .09 RPM
SRP018288_heart 29 .02 RPM
SRP018288_kidney 61 .07 RPM
SRP018288_liver 394 .18 RPM
SRP018288_lung 52 .64 RPM
SRP018856_adipose 51 .30 RPM
SRP035408_brain 83 .82 RPM
SRP035408_liver 134 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000011907 ortholog_one2many 1 retrogene
retro_etel_246,
Homo sapiens ENSG00000109917 ortholog_one2one 1 retrogene
retro_hsap_3639,
Gorilla gorilla ENSGGOG00000000664 ortholog_one2one 1 retrogene
retro_ggor_2455,
Myotis lucifugus ENSMLUG00000014012 ortholog_one2one 1 retrogene
retro_mluc_2167,
Macaca mulatta ENSMMUG00000020287 ortholog_one2one 1 retrogene
retro_mmul_1808,
Mus musculus ENSMUSG00000032078 ortholog_one2one 2 retrogenes
retro_mmus_3602, retro_mmus_3701,
Otolemur garnettii ENSOGAG00000009977 ortholog_one2one 1 retrogene
retro_ogar_506,
Pongo abelii ENSPPYG00000025914 ortholog_one2one 1 retrogene
retro_pabe_2986,
Pan troglodytes ENSPTRG00000004312 ortholog_one2one 1 retrogene
retro_ptro_2464,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_1150 69.71 60.18
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Download FASTA sequences of all ENSSSCG00000015066 retrocopies