Parental gene:

MRPL3, ENSSSCG00000011179

Aliases:None
Description:mitochondrial ribosomal protein L3 [Source:HGNC Symbol;Acc:10379]
Organism:Pig (Sus scrofa)
Coordinates:13:763798..803373(+)


>ENSSSCG00000011179
ATGGCTCCGGCAGCTCTTCTTCCGTCGTGGGGGCAGCGGGGAGCAGCGGCTGGCGGCGGCGGAAAGGCTTGGGAGGGTCG
GCGGCGGAACGCCCTGAAAGCGGAGTGGCGGGGCGCCCAGAGGTGTAGCGGTCGCGCCCTCCTCGGCCTCACTATGCCCG
GCTGGGGGCTGCTGGGTAGGGCCGGCGCCCGGGTACTGGGCTGCGGCGCGGATGGCCTGGGTGCCTCCCGGGGCTTGGGA
AACAGAACAGACATCTGTCTTTTGGTTAGAAGTCTCCATGGCAAGAGTGTTACTTGGTGGGATGAGCATCTTTCTGAAGA
AAACGTTCCCTTTGTTAAGCAGTTGGTCTCTGATGAAAATAAAGCCCAATTAGCAAGTAAACTCTGTCCTCTGAAAGATG
AGCCATGGCCTATACACCCTTGGGAACCAGGTTCCTCTAGAGTAGGCCTCATTGCACTGAAGCTAGGCATGATGCCCTTA
TGGACCAAAGATGGTCAGAAGCATGTAGTCACGTTACTTCAGGTACAAGACTGTCATGTCCTAAAATATACTCCAAAGGA
AAATCATAATGGAAGAATGGCAGCCCTAACTGTAGGAGGAAAAACTGTATCACATTTCCATAAATCTGCATCTATATTGG
AATTTTACCAGGAACTTGGATTGCCTCCAAAACAGAAAGTTAAAATCTTTAATGTAACAGAAAATGCTGTAATTAAGCCA
GGCACCCCTCTATACGCTGCTCACTTTCGTCCAGGACAGTATGTGGATGTCACGGCCAAAACTATTGGCAAAGGTTTTCA
AGGTGTCATGAGAAGATGGGGATTTAAAGGCCAGCCTGCTACTCATGGTCAAACGAAAACCCACAGGAGGCCTGGAGCTA
TTTCAACTGGTGATGTTGCCAGAGTGTGGCCTGGAACTAAAATGCCTGGACAGTTGGGGAACATCGATAGGACAGCATTT
GGACTGAAAGTGTGGAGAATAAACACAAAACACAATATAATCTATGTAAATGGCTCTGTACCTGGACACAAAAATTGCCT
AGTGAAGATCAAAGATTCTAAACTGCCTGCATATAAGGATTTCTGTAAAAATCTGCCATTCCCCACCTACTTTCCTGATG
GAGATGAAGAGGCACTACCAGAAGATTTGTATGATGAAAATGTGTGTCAGCCTGGGGCACCTTCTATTACATTCACCTGA

Library Parental gene expression (RPM)
SRP014902_placenta 10 .75 RPM
SRP014902_testis 60 .54 RPM
SRP018288_heart 44 .50 RPM
SRP018288_kidney 56 .54 RPM
SRP018288_liver 27 .82 RPM
SRP018288_lung 24 .44 RPM
SRP018856_adipose 38 .57 RPM
SRP035408_brain 27 .76 RPM
SRP035408_liver 22 .78 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000021216 ortholog_one2one 1 retrogene
retro_cpor_324,
Dasypus novemcinctus ENSDNOG00000014498 ortholog_one2one 1 retrogene
retro_dnov_178,
Homo sapiens ENSG00000114686 ortholog_one2one 1 retrogene
retro_hsap_1236,
Gorilla gorilla ENSGGOG00000011128 ortholog_one2one 1 retrogene
retro_ggor_969,
Microcebus murinus ENSMICG00000009524 ortholog_one2one 1 retrogene
retro_mmur_1106,
Ochotona princeps ENSOPRG00000000501 ortholog_one2one 1 retrogene
retro_opri_589,
Pan troglodytes ENSPTRG00000015396 ortholog_one2one 1 retrogene
retro_ptro_850,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_126 62.90 69.42
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Download FASTA sequences of all ENSSSCG00000011179 retrocopies