Parental gene:

RPS4X, ENSSARG00000010806

Aliases:None
Description:ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424]
Organism:Shrew (Sorex araneus)
Coordinates:scaffold_154889:192..2668(+)


>ENSSARG00000010806
GCTCCTCGTCCATCCACTGGCCCCCACAAACTGAGAGAGTGTCTTCCACTCATCATTTTCCTAAGGAACAGGCTTAAGTA
TGCTCTGACAGGAGACGAGGTGAAGAAGATCTGCATGCAGCGATTCATTAAGATTGATGGCAAGGTCCGAACTGATATAA
CCTACCCGGCAGGTTTTATGGATGTCATCAGTATTGATAAGACGGGAGAGAATTTCCGGCTGATCTATGACACCAAGGGA
CGCTTTGCTGTTCATCGCATTACTCCTGAGGAGGCTAAATACAAGTTGTGCAAAGTGAGGAAGATCTTTGTGGGCACCAA
AGGAATCCCTCACTTGGTGACACACGATGCTCGCACCATTCGCTACCCGGATCCCCTCATTAAGGTTAATGACACCATTC
AGATTGATTTGGAAACTGGCAAGATCACAGATTTCATCAAGTTTGACACTGGTAACCTGTGCATGGTGACTGGAGGTGCT
AATTTGGGAAGAATTGGTGTGATCACCAATAGAGAGAGACATCCTGGTTCTTTTGATGTCGTCCATGTGAAAGATGCCAA
TGGCAATAGCTTTGCCACCCGCCTGTCCAACATTTTTGTGATTGGCAAGGGCAACAAACCATGGATTTCTCTTCCCCGAG
GAAAAAGCATCCGCCTCACCATTGCTGAAGAGAGAGACAAAAGACTGGCAGCCAAGCAGAGCAGTGGCTGA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000014601 ortholog_one2one 1 retrogene
retro_acar_82,
Cavia porcellus ENSCPOG00000006337 possible_ortholog 3 retrogenes
retro_cpor_1023, retro_cpor_1075, retro_cpor_31,
Equus caballus ENSECAG00000010852 possible_ortholog 6 retrogenes
retro_ecab_34, retro_ecab_435, retro_ecab_443, retro_ecab_614, retro_ecab_757, retro_ecab_850,
Homo sapiens ENSG00000129824 possible_ortholog 1 retrogene
retro_hsap_1704,
Meleagris gallopavo ENSMGAG00000009671 ortholog_one2many 1 retrogene
retro_mgal_3,
Monodelphis domestica ENSMODG00000011070 possible_ortholog 1 retrogene
retro_mdom_238,
Mustela putorius furo ENSMPUG00000005294 possible_ortholog 11 retrogenes
retro_mputfur_1044, retro_mputfur_1176, retro_mputfur_1325, retro_mputfur_1326, retro_mputfur_1393, retro_mputfur_160, retro_mputfur_205, retro_mputfur_48, retro_mputfur_725, retro_mputfur_876, retro_mputfur_988,
Otolemur garnettii ENSOGAG00000011808 possible_ortholog 2 retrogenes
retro_ogar_121, retro_ogar_229,
Pan troglodytes ENSPTRG00000022470 possible_ortholog 1 retrogene
retro_ptro_1153,
Rattus norvegicus ENSRNOG00000003201 possible_ortholog 1 retrogene
retro_rnor_135,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sara_202 84.57 74.15
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2. retro_sara_245 72.50 50.85
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3. retro_sara_297 98.31 100.00
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4. retro_sara_311 68.72 94.92
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5. retro_sara_321 72.33 66.95
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6. retro_sara_612 97.47 100.00
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Download FASTA sequences of all ENSSARG00000010806 retrocopies