Parental gene:

Mrpl40, ENSRNOG00000049686

Aliases:None
Description:39S ribosomal protein L40, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P83565]
Organism:Rat (Rattus norvegicus)
Coordinates:11:89378581..89384417(+)


>ENSRNOG00000049686
ATGGCTACCGCTGCGATGCTGTGTGCTGCGCGGGCTCTGCGACCTCGGAGCTGGATCCCAGGAACCTGCCAGGCACAGGT
CAGACACACCCACCAGAGAGCTTCCTTGCTGTCCTTCTGGGAGCTCATCCCCATGAGAGCTGAACCTCTACGGAAGAAGA
AGAAGGTAGACCCTAGAAAGGATCAAGCAGCAAAGGATCGCTTGAAAAAGAGGATCCGAAAACTGGAAAGAGCCTCCCAA
GAACTGGTTCCTATTGAAGATTTTATTACCCCTGTGAGGTTCTTGGATAAATCAAGACAGCGACCTCAGGAGGAGCATTC
TTTTGAGGAGAGTGAGCGGAGAGCTCTTCTGCTGAAGAGGTGGGCACTGTATAAGCAGCAGGAGCATGAGATGGAGAGGG
ACGCCATCAGAGCCATGCTGGAAGCCCAGCAGGAAGCCCTGGAACAGCTGAAACTTGAGTCTACAGAGCTCTATGCCGAA
GCCATAAAGCGGGACACCAGCCTATTCCCCTTTGAGAAAGAAGGGCCACATTACACACCGCCTGTCCCTAACTACCAGGC
CCCTGAAGGCAGGTACAATGACATCACCAAGGTGTACACACAAGTAGAATTCAAAAGATAG

Library Parental gene expression (RPM)
SRP017611_brain 5 .90 RPM
SRP017611_kidney 8 .93 RPM
SRP017611_liver 6 .59 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000001053 ortholog_one2one 1 retrogene
retro_acar_149,
Ailuropoda melanoleuca ENSAMEG00000011421 ortholog_one2one 1 retrogene
retro_amel_257,
Callithrix jacchus ENSCJAG00000001584 ortholog_one2one 1 retrogene
retro_cjac_3220,
Equus caballus ENSECAG00000009876 ortholog_one2one 1 retrogene
retro_ecab_687,
Homo sapiens ENSG00000185608 ortholog_one2one 1 retrogene
retro_hsap_1020,
Gorilla gorilla ENSGGOG00000012336 ortholog_one2one 1 retrogene
retro_ggor_807,
Myotis lucifugus ENSMLUG00000002456 ortholog_one2many 1 retrogene
retro_mluc_1950,
Macaca mulatta ENSMMUG00000016081 ortholog_one2many 1 retrogene
retro_mmul_57,
Mustela putorius furo ENSMPUG00000003865 ortholog_one2one 1 retrogene
retro_mputfur_394,
Nomascus leucogenys ENSNLEG00000005372 ortholog_one2one 1 retrogene
retro_nleu_899,
Pongo abelii ENSPPYG00000011578 ortholog_one2one 1 retrogene
retro_pabe_857,
Tarsius syrichta ENSTSYG00000014747 ortholog_one2one 1 retrogene
retro_tsyr_1589,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1624 90.53 92.23
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Download FASTA sequences of all ENSRNOG00000049686 retrocopies