Parental gene:

MRPL40, ENSECAG00000009876

Aliases:None
Description:mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:14491]
Organism:Horse (Equus caballus)
Coordinates:Un0002:534409..537131(+)


>ENSECAG00000009876
CTTCTGGGAACTTGGCAGACACAGATTAGAGACACCCGCCGGCGAGCTTCGTTGTTGTCCTTCTGGGATCTCGTTCCCAT
GAGAGCAGAACCTCTGCGAAAGAAGAAGAAGGTAGATCCTAAAAAAGACCAAGCAGTAAAGGACCGTTTGAAAAAGAGGA
TCCGACGACTGGAAAAGGCTAGCCAGGAGCTAATTCCCATTGAAGATTTTATTACACCTGTGAAGTTCTTGGATCAAGCA
CGACAGCGGCCTCACACAGAGCTCCCCTTTGAGGAAGGCGAGCGGAGAGCTCTGCTCCTGAAGAAGTGGTCCCTGTACAA
GCAGCGAGAGCATGAGATGGAGAGGGACACCATCAGGTCCATGCTTGAGGCCCAGCAGGAAGCTCTGCAGGAGCTACAAC
TCATGTCCCCAGAGCTCCATGAGGAGGCCATCAAGCGGGACCCCTGTCTGTTCCCCTTTGAGAGAGAAGGGCCAGATTAC
ACGCCACCGGTCTCCAACTACCAGCCCCCTGAAGGCAGGTACCAGGACATCACCAAGGTATACACACAGGTGGAGTTCAA
GAGATAG

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 7 .32 RPM
SRP021940_cerebellum 24 .36 RPM
SRP021940_embryo 20 .41 RPM
SRP021940_placental_villous 13 .57 RPM
SRP021940_synovial_membrane 13 .89 RPM
SRP021940_testis 26 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000001053 ortholog_one2one 1 retrogene
retro_acar_149,
Ailuropoda melanoleuca ENSAMEG00000011421 ortholog_one2one 1 retrogene
retro_amel_257,
Callithrix jacchus ENSCJAG00000001584 ortholog_one2one 1 retrogene
retro_cjac_3220,
Homo sapiens ENSG00000185608 ortholog_one2one 1 retrogene
retro_hsap_1020,
Gorilla gorilla ENSGGOG00000012336 ortholog_one2one 1 retrogene
retro_ggor_807,
Myotis lucifugus ENSMLUG00000002456 ortholog_one2many 1 retrogene
retro_mluc_1950,
Macaca mulatta ENSMMUG00000016081 ortholog_one2many 1 retrogene
retro_mmul_57,
Mustela putorius furo ENSMPUG00000003865 ortholog_one2one 1 retrogene
retro_mputfur_394,
Nomascus leucogenys ENSNLEG00000005372 ortholog_one2one 1 retrogene
retro_nleu_899,
Pongo abelii ENSPPYG00000011578 ortholog_one2one 1 retrogene
retro_pabe_857,
Rattus norvegicus ENSRNOG00000049686 ortholog_one2one 1 retrogene
retro_rnor_1624,
Tarsius syrichta ENSTSYG00000014747 ortholog_one2one 1 retrogene
retro_tsyr_1589,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_687 69.60 64.36
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Download FASTA sequences of all ENSECAG00000009876 retrocopies