Parental gene:

Larp4, ENSRNOG00000049091

Aliases:None
Description:La ribonucleoprotein domain family, member 4 [Source:MGI Symbol;Acc:MGI:2443114]
Organism:Rat (Rattus norvegicus)
Coordinates:X:116149229..116180301(+)


>ENSRNOG00000049091
GAAATGTGTTTTGTAGAGGTGACATCTAAAGGCACTGGTTTAAATCCTAATGCCAAAGTATGGCAAGAAATTCCTTCTGG
AAATCCAGATGGCACTCCTGTAACTGAAACATCTTGGCATGAAACTGCAGCCACATCTGGATCTCACCCCGAGGGCAATA
CAGAACTTTCAGAGGAAATGTGTAAGGAATATGAAGTGATGTATTCTCCATCTTGTGAACCCACAAGAAATACCGCAGAC
ATTGAAGAATCAGCTGATGGAATGATCTTAGGACCTGAAGACCTGAGTTACCAACTATACGATGTTTCTGGTAACCTTTG
TTCTATTATTACTAAAAGTGATTTTAGCAAGACCATAAAAAGACAGACTGATTACTGCTTTTTTCTGCAAGAAAACTTAT
CAAAGGACCTGTACTTGATATCTCAAATGGATAGTGATCAGTTCATCCCAATATGGACAGTTGCCAACATGGAAGAAATA
AAAAAATTGACTACTGATCCAGACTTAATTCTTGAAGTATTGAGATGTATACAGATATTTCCTAAATTTGATAATGAACT
TGTCCCTCCCTCCATCCCTACCAACTGTTCTCTTCATTTTCCCTCCACCAGGCCTGTAAGAGAAGTGAAAGCTTTGTTTA
AAAATGAAAACTGCCCCAAAGTGATAAGCTGTGAGTTTGCACACAACAGCAACTGGTATATCACTTTCCAGTCAGACACA
GATGCACAGCAGGCTTTTAAATACTTACGAGAAGAAGTTAAAACGTTTCAGGGCAAGCCAATCATGTTTGTTGTCAGATT
TCACGAAATTTGCCTTCCTACTTCTTCCCATCGTTATTCATGGTTTAGATTTGAGCAGATGGTGCAGCCTCATAACCACT
GTGATCTCCTGACTCCTCCTTCCTTGTCTCTCACTGCGCATCCTTGCAGTGTAGCACTGCACACACACAAACTAGTTCTT
ATGAGCAAAGGCATGACTTCTTCCGTATCTTTTTATGAACCAAATAAAGTGGATAGCAGGGGTTTTTTTGTATTTATCTT
TAAAAATAAAGGGTCATACAAGAATAATAAAAATTATGAACAAACCAGACCTTTTATAAAGATTAGTGTGAAGCCTCATT
TTAGGTCATCTAGTGGTTCAGAACACTCAACAGATGGATCTGTGTCATTGGGGGATGGACCGGTGAGCAGATCCAGTTCA
AGGATCTTTCTTTCTGAACGGCATAACCCAACAGTAACAGGGCATCAGGAACAGACTTATCTTCCAAAGGATGCTCCCAT
TTTACAGATGGAACAGAATGGGGACTTTGGAAGAGGCAGGAGAACTCTCTTTAGAGGTCGAAGACGAAGAGAAGATGACA
GGATCCCAAGACCCCAGCCTGCAGCAACTGAAGCAAAGGCTCCAGCACCAAAGTTTGACTTACTTGCTACAAATTTCCCT
CCTCTACCCGGAAGCTCATCAAGAATGCCAGATGAACTCGCTTTGGAGAACAGAATGTCTGATGTTGTTAAAGGTGTCTG
CAAAGAAAAGGACAATGAGGACTTGAGAGTTAGTTGCCCGGTGCCTGCAGAAGACGGACAGACAGACTGCGCTTCTGTGC
CACAACTCAGCATAAGTCCTAGTCCTCCATGTACAGCTGAGCCTCCTGCATTAAGCACAACTCAGCAGGAGAAGGATCAA
ATGGAGGATTCCGCTGCTCCAAAAGATGTTCTCAATCCAGTGCCAGTGCCAGTGTCTTCTCCAACTACTACAAAGCCATC
AAGGGCAAACACTGCTTCACCTTGCAATAGTACCGTAAATACACCTATAGCTGTGGCCCCACAGGAACCTCGAAAGTTAA
GCTATGCTGAAGTGTGCCAGAAGCCTCCTAAGGAGCCGTCTCCGGTTCTTGTCCAGCCACTGAGGGAGCTTCGGTCCAAT
GTAGTGTCTCCCACCAGAAACGAAGAGAACGGAGCTCCTGAGAAGCCTGTTGAGAAGCCACAGGAGAAACCGGAAACAAG
GGCTAGTAAGGATCATTCTGGCTTCCGAGGCAACACCATTCCCCGGGGAGCAGCTGGAAAAATCAGGGAACAGAGACGCC
AGTTCAGCCATAGGGCTGCACCTCAGGGAGTGACTCGACAGAATGGGAAGGAGCAAATTGTGAGTAGGAAGAGCCCAAAA

Library Parental gene expression (RPM)
SRP017611_brain 7 .33 RPM
SRP017611_kidney 19 .61 RPM
SRP017611_liver 13 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000161813 ortholog_one2one 1 retrogene
retro_hsap_1483,
Myotis lucifugus ENSMLUG00000012513 ortholog_one2many 1 retrogene
retro_mluc_1180,
Macaca mulatta ENSMMUG00000008172 ortholog_one2one 1 retrogene
retro_mmul_2129,
Mus musculus ENSMUSG00000023025 ortholog_one2one 1 retrogene
retro_mmus_3568,
Nomascus leucogenys ENSNLEG00000017798 ortholog_one2one 1 retrogene
retro_nleu_2388,
Pan troglodytes ENSPTRG00000004935 ortholog_one2one 1 retrogene
retro_ptro_1003,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_644 88.83 52.78
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Download FASTA sequences of all ENSRNOG00000049091 retrocopies