Parental gene:

Rab18, ENSRNOG00000018972

Aliases:None
Description:Ras-related protein Rab-18 [Source:UniProtKB/Swiss-Prot;Acc:Q5EB77]
Organism:Rat (Rattus norvegicus)
Coordinates:17:61632852..61664236(+)


>ENSRNOG00000018972
ATGGACGAGGACGTGCTGACCACTCTGAAGATCCTCATCATTGGCGAGAGTGGGGTGGGCAAGTCCAGCCTGCTCCTGAG
GTTCACAGACGACACCTTTGATCCAGAACTTGCAGCAACAATAGGTGTTGACTTTAAGGTGAAAACGATTTCAGTGGATG
GAAATAAGGCTAAACTTGCAATATGGGATACAGCTGGTCAAGAAAGGTTCAGAACATTAACTCCCAGCTATTATAGAGGT
GCACAGGGAGTTATATTAGTCTATGATGTCACAAGAAGAGACACCTTTGTTAAACTGGATAATTGGTTAAATGAATTGGA
AACATACTGTACAAGAAATGACATAGTAAACATGCTAGTTGGAAATAAAATTGATAAGGAAAACCGTGAAGTCGATAGAA
ATGAAGGCTTGAAATTTGCACGCAAGCATTCTATGTTGTTCATAGAGGCAAGTGCAAAAACCTGTGATGGTGTTCAGTGT
GCCTTTGAGGAGCTGGTTGAAAAGATCATCCAGACACCTGGACTGTGGGAAAGTGAGAACCAGAACAAAGGAGTCAAGCT
GTCCCCCAGGGAGGAGAGCCACGGGGGAGGAGCCTGTGGCGGTTACTGTTCTGTGCTATAA

Library Parental gene expression (RPM)
SRP017611_brain 43 .86 RPM
SRP017611_kidney 36 .22 RPM
SRP017611_liver 27 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009871 ortholog_one2one 1 retrogene
retro_btau_1691,
Choloepus hoffmanni ENSCHOG00000005565 ortholog_one2one 4 retrogenes
retro_chof_2391, retro_chof_256, retro_chof_396, retro_chof_846,
Cavia porcellus ENSCPOG00000002234 ortholog_one2one 2 retrogenes
retro_cpor_633, retro_cpor_652,
Dipodomys ordii ENSDORG00000014338 ortholog_one2one 1 retrogene
retro_dord_419,
Monodelphis domestica ENSMODG00000008253 ortholog_one2many 1 retrogene
retro_mdom_146,
Oryctolagus cuniculus ENSOCUG00000022307 ortholog_one2one 2 retrogenes
retro_ocun_1699, retro_ocun_841,
Otolemur garnettii ENSOGAG00000028015 ortholog_one2one 2 retrogenes
retro_ogar_2587, retro_ogar_2973,
Sarcophilus harrisii ENSSHAG00000007613 ortholog_one2one 1 retrogene
retro_shar_281,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2744 95.67 100.00
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2. retro_rnor_2962 60.66 58.25
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Download FASTA sequences of all ENSRNOG00000018972 retrocopies