Parental gene:

Taf5l, ENSRNOG00000018027

Aliases:None
Description:TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L [Source:RefSeq peptide;Acc:NP_001100912]
Organism:Rat (Rattus norvegicus)
Coordinates:19:67497410..67516350(-)


>ENSRNOG00000018027
ATGAAACGAGTGCGCACGGAGCAGGTTCAGGTGGCAGTGTCCTGCTACCTCAAACGCCGGCAGTACGTGGACTCAGAAGG
CCCTTTGAAGCAAGGCCTGAGACTCTCACAGACCCCTGAGGAGATGGCGGCCAACCTCACAGTCCAATCAGAATCTGGTT
GTGCCAATGCGGTGTCTGCAGCCCCTTGCCAGGCAGAACCCCAGCAATATGAAGTACAGTTTGGACGACTGAGGAACTTT
CTCACTGATTCTGACTCCCAGTACAGCCATGAAGTTATGCCTCTCCTCTACCCTCTCTTTGTCTACCTCCACCTCAACCT
GGTCCAGAGTGGCCCCAAGAGCACCGTGGAAAGCTTCTATAGCCGCTTCCATGGAATGTTCCTGCAGAATGCAAGTCAGA
AGGACATCATCGAGCAACTGCAGACCACGCAGACCATCCAGGATATTCTGTCAAACTTCCAGCTTCGTGCATTCCTGGAC
AACAAGTATGTGGTCCGTCTCCAGGAAGATAGCTACAACTACCTTATCCGCTACCTCCAAAGCGACAACAACACTGCCCT
GTGCAAGGTGCTCGCCGTGCACATTCACTTGGACGTGCAGCCTGCTAAGAGGACAGACTACCAGCTGTATGCCAGTGGTG
GCTCCTCCCGCAGTGAAAGCAGCAGCCTGGAGCCACCAGATGTGCCCAACCCTATCCTGCAGAACGAGGCTGCCCTGGAG
GTCTTGCAGGAGAGTATCAAGCGGGTCAAGGATGGACCTCCCTCCCTCACCACCATCTGCTTCTACGCCTTCTATAACAC
AGAGCAGCTGCTGAATACCGCAGAGATCTCCTCTGACAGCAAACTGCTGGCTGCTGGGTTTGACAACTCCTGCATAAAGC
TCTGGAGCTTGCGGTCCAAAAAACTGAAGTCAGAGCCCCACTGTGTGGACACATCCCGTGTCCGGCTGGCTTGTGACACT
CTGGAGGAGGAGGAGAGCGAAGACGATGACGTAGGCACGGAAATGAAGATTCTGCGGGGACACTGTGGCCCAGTGTATAG
CACACGGTTCCTCGCGGACAGCTCAGGGCTGCTCTCTTGTTCTGAAGATATGTCCATCAGGTACTGGGACCTGGGGAGCT
TCACCAACACTGTGCTGTATCAGGGACATGCCTACCCTGTGTGGGACGTGGACATCAGCCCCTACAGCCTGTACTTTGCC
AGTGGGTCCCATGACCGTACCGCCAGGCTGTGGTCTTTTGATCGGACGTACCCGCTGAGGATATATGCGGGGCACCTGGC
AGATGTGGACTGTGTCAAATTCCACCCCAACTCAAACTACTTAGCTACTGGCTCCACTGACAAAACTGTTCGTCTATGGA
GTGCCCAGCAGGGGAACTCAGTGCGGCTTTTTACAGGTCACCGAGGCCCCGTGCTCTCCCTCTCCTTTTCTCCCAATGGT
AAGTACTTGGCATCTGCTGGTGAGGACCAGCGGTTAAAGTTGTGGGACTTGGCCTCTGGGACACTTTTTAAAGAACTGAG
AGGCCACACGGACAGCATCACCAGTCTGGCCTTTAGCCCGGACAGCGGTCTGATTGCTTCTGCCTCCATGGACAACTCTG
TACGCGTCTGGGACATCAGAAGCACGTGCTGCAACACACCAGCTGACGGCTCTTCTGGGGAGCTTGTGGGCGTGTACACT
GGGCAGATGAGCAACGTCCTGAGTGTACAGTTCATGGCCTGCAACCTCCTCCTAGTGACTGGAATCACACAAGAGAATCA
AGAACATTAA

Library Parental gene expression (RPM)
SRP017611_brain 4 .96 RPM
SRP017611_kidney 3 .42 RPM
SRP017611_liver 3 .77 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000034225 possible_ortholog 1 retrogene
retro_btau_1300,
Callithrix jacchus ENSCJAG00000010986 possible_ortholog 1 retrogene
retro_cjac_4042,
Homo sapiens ENSG00000135801 possible_ortholog 1 retrogene
retro_hsap_1750,
Gorilla gorilla ENSGGOG00000028544 possible_ortholog 1 retrogene
retro_ggor_2253,
Pan troglodytes ENSPTRG00000002091 possible_ortholog 1 retrogene
retro_ptro_1216,
Rattus norvegicus ENSRNOG00000012929 within_species_paralog 1 retrogene
retro_rnor_2136,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_509 96.78 100.00
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Download FASTA sequences of all ENSRNOG00000018027 retrocopies