Parental gene:

Psma7, ENSRNOG00000008630

Aliases:None
Description:proteasome subunit alpha type-7 [Source:RefSeq peptide;Acc:NP_001008218]
Organism:Rat (Rattus norvegicus)
Coordinates:3:181692290..181698641(+)


>ENSRNOG00000008630
ATGAGCTACGACCGCGCCATCACCGTCTTCTCGCCCGACGGCCACCTCTTCCAAGTGGAGTACGCGCAGGAGGCGGTCAA
GAAGGGCTCCACCGCGGTTGGTGTTCGAGGAAGGGACATTGTTGTTCTTGGTGTGGAAAAGAAGTCGGTGGCCAAGCTAC
AAGATGAAAGAACGGTCCGGAAAATCTGTGCTCTGGACGATAATGTCTGCATGGCCTTTGCAGTTGTAGCCTCTGTCTCA
GGTCTCACTGCCGATGCAAGGATAGTCATCAACAGAGCCAGGGTAGAGTGCCAGAGCCACCGGCTGACCGTGGAGGACCC
AGTGACTGTGGAGTACATCACCCGCTACATTGCCAGTCTGAAGCAGCGTTACACACAGAGCAATGGGCGCAGGCCATTTG
GTATCTCTGCCCTAATTGTGGGTTTCGACTTCGATGGCACCCCCAGACTCTATCAGACTGACCCCTCAGGCACATACCAT
GCTTGGAAGGCCAATGCCATAGGCCGGGGTGCCAAGTCGGTGCGTGAATTTCTGGAGAAGAACTACACAGATGATGCCAT
TGAAACAGACGATCTGACCATCAAACTGGTGATCAAGGCGCTGCTGGAAGTGGTCCAGTCAGGTGGCAAAAACATTGAAC
TTGCTGTCATGAGGCGGGATCAGCCCCTCAAGATTCTAAGTCCTGAAGAAATTGAGAAGTATGTTGCTGAAATCGAGAAG
GAGAAAGAAGAAAATGAAAAGAAGAAGCAGAAGAAAGCATCTTGA

Library Parental gene expression (RPM)
SRP017611_brain 58 .52 RPM
SRP017611_kidney 94 .49 RPM
SRP017611_liver 55 .94 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000014419 ortholog_one2one 1 retrogene
retro_cjac_426,
Felis catus ENSFCAG00000003249 possible_ortholog 1 retrogene
retro_fcat_1621,
Mus musculus ENSMUSG00000027566 ortholog_one2one 1 retrogene
retro_mmus_407,
Ictidomys tridecemlineatus ENSSTOG00000012489 ortholog_one2one 1 retrogene
retro_itri_279,
Tupaia belangeri ENSTBEG00000012281 ortholog_one2one 2 retrogenes
retro_tbel_1048, retro_tbel_2392,
Drosophila melanogaster FBgn0004066 ortholog_many2many 1 retrogene
retro_dmel_63,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2693 81.43 54.72
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Download FASTA sequences of all ENSRNOG00000008630 retrocopies