Parental gene:

Psma7, ENSMUSG00000027566

Aliases:Psma7, C6-I
Description:proteasome (prosome, macropain) subunit, alpha type 7 [Source:MGI Symbol;Acc:MGI:1347070]
Organism:Mouse (Mus musculus)
Coordinates:2:180036372..180042433(-)


>ENSMUSG00000027566
ATGAGCTACGACCGCGCCATCACCGTCTTCTCGCCCGACGGCCACCTCTTCCAAGTGGAGTACGCGCAGGAGGCGGTCAA
AAAGGGCTCCACCGCGGTTGGTGTTCGAGGAAAGGACATTGTTGTTCTTGGTGTGGAAAAAAAATCAGTGGCCAAGCTAC
AAGATGAAAGAACAGTACGAAAAATCTGCGCCTTGGACGATAACGTCTGTATGGCCTTTGCAGGTCTCACCGCTGATGCA
AGGATAGTCATCAACAGAGCCCGGGTAGAGTGCCAGAGCCACCGGCTGACAGTGGAGGACCCAGTGACTGTGGAGTACAT
CACCCGCTACATTGCGAGTCTGAAGCAGCGTTATACACAGAGCAATGGGCGCAGGCCATTTGGTATCTCGGCCCTAATTG
TGGGTTTTGACTTTGATGGCACTCCCAGACTCTATCAGACTGACCCCTCGGGCACATACCATGCTTGGAAGGCCAATGCC
ATAGGCCGGGGCGCCAAGTCAGTGCGTGAATTTCTGGAGAAGAACTACACAGATGATGCCATTGAAACAGATGATCTGAC
CATCAAACTTGTGATCAAGGCACTGTTAGAGGTGGTCCAGTCAGGTGGCAAAAACATCGAACTTGCCGTCATGAGGCGGG
ATCAGCCGCTCAAGATTCTAAATCCTGAAGAAATTGAGAAGTATGTTGCTGAAATTGAGAAGGAGAAAGAAGAAAATGAA
AAGAAGAAGCAAAAGAAAGCATCTTGA

Library Parental gene expression (RPM)
SRP007412_brain 52 .43 RPM
SRP007412_cerebellum 64 .31 RPM
SRP007412_heart 62 .63 RPM
SRP007412_kidney 77 .92 RPM
SRP007412_liver 76 .55 RPM
SRP007412_testis 18 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000014419 ortholog_one2one 1 retrogene
retro_cjac_426,
Felis catus ENSFCAG00000003249 possible_ortholog 1 retrogene
retro_fcat_1621,
Rattus norvegicus ENSRNOG00000008630 ortholog_one2one 1 retrogene
retro_rnor_2693,
Ictidomys tridecemlineatus ENSSTOG00000012489 ortholog_one2one 1 retrogene
retro_itri_279,
Tupaia belangeri ENSTBEG00000012281 ortholog_one2one 2 retrogenes
retro_tbel_1048, retro_tbel_2392,
Drosophila melanogaster FBgn0004066 ortholog_many2many 1 retrogene
retro_dmel_63,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_407 59.63 64.11
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Download FASTA sequences of all ENSMUSG00000027566 retrocopies