Parental gene:

Eif4h, ENSRNOG00000001454

Aliases:Eif4h, Wbscr1
Description:Eukaryotic translation initiation factor 4H [Source:UniProtKB/Swiss-Prot;Acc:Q5XI72]
Organism:Rat (Rattus norvegicus)
Coordinates:12:27093553..27110196(+)


>ENSRNOG00000001454
ATGGCGGACTTCGATACCTACGACGATCGGGCCTACAGCAGCTTCGGCGGCGGTAGAGGGTCCCGCGGCAGTGCTGGTGG
CCATGGGTCCCGAAGCCAGAAGGAGCTACCCACAGAGCCCCCCTACACAGCTTACGTAGGAAATCTCCCTTTTAACACAG
TTCAGGGTGACATAGATGCTATCTTTAAGGATCTCAGCATACGGAGTGTGCGGCTAGTCAGAGACAAAGACACAGACAAA
TTTAAAGGGTTCTGCTATGTAGAATTTGATGAGGTGGATTCCCTGAAGGAGGCTCTGACCTACGACGGTGCACTCTTGGG
TGACCGGTCACTTCGTGTGGACATTGCAGAAGGCAGAAAACAAGACAAAGGTGGCTTTGGGTTCAGGAAAGGCGGACCTG
ATGACAGAGGAATGGGTGGCTCTCGAGAACCGAGAGGTGGATGGGATTCCCGGGATGACTTCAGCTCTGGCTACAGGGAT
GACTTCTTAGGGGGTAGGGGGGGCAGTCGCCCTGGGGACCGGCGAGCAGGCCCTCCAATGGGGAGTCGCTTTCGAGATGG
CCCTCCTCTGCGTGGCTCCAACATGGACTTCAGAGAACCCACAGAAGAGGAACGAGCACAGAGACCGCGGCTGCAGCTTA
AACCTCGGACAGTGGCAACACCCCTCAATCAAGTAGCCAACCCCAACTCAGCCATCTTCGGGGGAGCCAGGCCCAGAGAG
GAAGTGGTTCAGAAGGAGCAAGAATGA

Library Parental gene expression (RPM)
SRP017611_brain 281 .98 RPM
SRP017611_kidney 197 .48 RPM
SRP017611_liver 93 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000002525 ortholog_one2one 2 retrogenes
retro_chof_1279, retro_chof_1903,
Felis catus ENSFCAG00000029386 ortholog_one2one 1 retrogene
retro_fcat_580,
Gorilla gorilla ENSGGOG00000005284 ortholog_one2one 1 retrogene
retro_ggor_1598,
Macaca mulatta ENSMMUG00000006205 ortholog_one2one 2 retrogenes
retro_mmul_2634, retro_mmul_619,
Mus musculus ENSMUSG00000040731 ortholog_one2one 1 retrogene
retro_mmus_3659,
Oryctolagus cuniculus ENSOCUG00000017685 ortholog_one2one 1 retrogene
retro_ocun_1475,
Otolemur garnettii ENSOGAG00000028051 ortholog_one2one 1 retrogene
retro_ogar_2796,
Pongo abelii ENSPPYG00000017489 ortholog_one2one 2 retrogenes
retro_pabe_1879, retro_pabe_1988,
Pan troglodytes ENSPTRG00000019287 ortholog_one2one 1 retrogene
retro_ptro_1489,
Rattus norvegicus ENSRNOG00000010103 within_species_paralog 2 retrogenes
retro_rnor_2467, retro_rnor_2972,
Tupaia belangeri ENSTBEG00000009558 ortholog_one2one 2 retrogenes
retro_tbel_1636, retro_tbel_2470,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2924 71.70 63.71
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Download FASTA sequences of all ENSRNOG00000001454 retrocopies