Parental gene:

Nrbf2, ENSRNOG00000000641

Aliases:None
Description:nuclear receptor-binding factor 2 [Source:RefSeq peptide;Acc:NP_071522]
Organism:Rat (Rattus norvegicus)
Coordinates:20:24818943..24837210(+)


>ENSRNOG00000000641
ATGGAAGTGATGGAAGGACCCCTCAACCTTGCTCACCAACAGAGCCGACGGGCAGACCGTTTGTTAGCTGCTGGGAAATA
CGAAGAAGCGATTTCTTGTCACAAAAAGGCGACAGCCTATCTCTCTGAAGCCATGAAGCTGACACAGTCTGAACAGGCTC
ACTTATCACTGGAACTGCAAAGGGATAGCCACATGAAGCAGCTTCTCCTCATCCAGGAGAGGTGGAAGAGAGCGAAGCGA
GAGGAGCGGTTGAAAGCGCAGCAGAGCACAGACCGGGATGGAGTCCCCCACCTGCAGGCATCTCACAGACCCTCTGAGGA
CTCGGAAGGCCAGAGCCCTCTTCTTTCTCAGACATACATCCCTTCCACAGAGAAGCGCCTCCCTGAGGTGCAGGGGGTCT
TTGACAGGGATCCAGACACGTTGCTATTTTTACTTCAGCAAAAGAATGAGCCGTCAGAGCCCTGTATTGGAAGCAAGGCC
CCAAAAGATGATAAGACGATTATAGAGGAGCAGGCAACCAAGATTGCAGAGTTGAAGAGGCACGTGGAGTTCCTTGTGGC
GGAGAACGAAAGACTAAGGAAAGAAAATAAACAGCTAAAGGCTGAAAAGGCCAGGCTCCTGAAGGGCCCAGCCGAGAAGG
AGCTGGATGTCGATGCGGACTTTGTGGAGAAGTCGGAGCTGTGGGGCTTGCCGCCACACTCGGACACCGCCACTGCCTCT
TCTACCTGGCAGAAGTTTGCAGCTAACACGGGGAAAGCCAAGGACATTCCAATACCCAACCTCCCGCCTCTGGATTTCCC
GTCTCCAGAACTCCCTCTGATGGAGCTCTCGGAGGACATTCTGAAAGGATTCATGAATGACTGA

Library Parental gene expression (RPM)
SRP017611_brain 4 .17 RPM
SRP017611_kidney 3 .84 RPM
SRP017611_liver 10 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004648 ortholog_one2one 3 retrogenes
retro_chof_1032, retro_chof_2250, retro_chof_2568,
Homo sapiens ENSG00000148572 ortholog_one2one 3 retrogenes
retro_hsap_2643, retro_hsap_3999, retro_hsap_433,
Gorilla gorilla ENSGGOG00000013016 ortholog_one2one 2 retrogenes
retro_ggor_1846, retro_ggor_2685,
Macropus eugenii ENSMEUG00000010849 ortholog_one2one 3 retrogenes
retro_meug_1385, retro_meug_2049, retro_meug_671,
Macaca mulatta ENSMMUG00000017726 ortholog_one2one 1 retrogene
retro_mmul_1523,
Monodelphis domestica ENSMODG00000017183 ortholog_one2one 1 retrogene
retro_mdom_1995,
Mus musculus ENSMUSG00000075000 ortholog_one2one 2 retrogenes
retro_mmus_1278, retro_mmus_1279,
Otolemur garnettii ENSOGAG00000005856 ortholog_one2one 1 retrogene
retro_ogar_2110,
Pongo abelii ENSPPYG00000002411 ortholog_one2one 3 retrogenes
retro_pabe_2327, retro_pabe_3285, retro_pabe_3286,
Pan troglodytes ENSPTRG00000002539 ortholog_one2one 3 retrogenes
retro_ptro_1780, retro_ptro_194, retro_ptro_2715,
Sarcophilus harrisii ENSSHAG00000004744 ortholog_one2one 1 retrogene
retro_shar_427,
Ictidomys tridecemlineatus ENSSTOG00000011341 ortholog_one2many 1 retrogene
retro_itri_183,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_994 99.30 100.00
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2. retro_rnor_1681 99.30 100.00
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Download FASTA sequences of all ENSRNOG00000000641 retrocopies