Parental gene:

NRBF2, ENSPTRG00000002539

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:10:61509826..61531832(+)


>ENSPTRG00000002539
ATGGAAGTAATGGAAGGACCCCTCAACCTGGCTCATCAACAGAGCAGACGAGCAGACCGTTTATTAGCTGCAGGCAAATA
CGAAGAGGCTATTTCTTGTCACAAAAAGGCTGCAGCGTATCTTTCTGAAGCCATGAAGCTGACACAGTCAGAGCAGGCTC
ATCTTTCACTGGAATTGCAAAGGGATAGCCATATGAAACAGCTCCTCCTCATCCAAGAGAGATGGAAAAGGGCCCAGCGT
GAAGAAAGATTGAAAGCCCAGCAGAACACAGACAAGGATGCAGCTGCCCATCTTCAGACATCTCACAAACCCTCTGCAGA
GGATGCAGAGGGCCAGAGTCCCCTTTCTCAGAAGTACAGCCCTTCCACAGAGAAATGCCTGCCTGAGATTCAGGGGATCT
TTGACAGGGATCCAGACACACTACTTTATTTACTTCAGCAAAAGAGTGAGCCAGCAGAGCCATGTATTGGAAGCAAAGCC
CCAAAAGATGATAAAACAATTATAGAGGAGCAGGCAACCAAAATTGCAGATTTGAAGAGGCATGTGGAATTCCTTGTGGC
TGAGAATGAAAGATTAAGGAAAGAAAATAAACAACTAAAGGCTGAAAAGGCCAGACTTCTAAAAGGTCCAATAGAAAAGG
AGCTGGATGTAGATGCTGATTTTGTAGAAACGTCAGAGTTATGGAGCTTGCCACCACATTCAGAAACTGCTACAGCCTCC
TCAACCTGGCAGAAGTTCGCAGCAAATACTGGGAAAGCCAAGGACATTCCAATCCCCAATCTTCCTCCCTTGGATTTTCC
ATCTCCAGAACTTCCTCTTATGGAGCTCTCTGAGGATATTCTGAAAGGATTTATGAATAATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 12 .39 RPM
SRP007412_cerebellum 9 .97 RPM
SRP007412_heart 3 .21 RPM
SRP007412_kidney 10 .41 RPM
SRP007412_liver 31 .20 RPM
SRP007412_testis 13 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004648 ortholog_one2one 3 retrogenes
retro_chof_1032, retro_chof_2250, retro_chof_2568,
Homo sapiens ENSG00000148572 ortholog_one2one 3 retrogenes
retro_hsap_2643, retro_hsap_3999, retro_hsap_433,
Gorilla gorilla ENSGGOG00000013016 ortholog_one2one 2 retrogenes
retro_ggor_1846, retro_ggor_2685,
Macropus eugenii ENSMEUG00000010849 ortholog_one2one 3 retrogenes
retro_meug_1385, retro_meug_2049, retro_meug_671,
Macaca mulatta ENSMMUG00000017726 ortholog_one2one 1 retrogene
retro_mmul_1523,
Monodelphis domestica ENSMODG00000017183 ortholog_one2one 1 retrogene
retro_mdom_1995,
Mus musculus ENSMUSG00000075000 ortholog_one2one 2 retrogenes
retro_mmus_1278, retro_mmus_1279,
Otolemur garnettii ENSOGAG00000005856 ortholog_one2one 1 retrogene
retro_ogar_2110,
Pongo abelii ENSPPYG00000002411 ortholog_one2one 3 retrogenes
retro_pabe_2327, retro_pabe_3285, retro_pabe_3286,
Rattus norvegicus ENSRNOG00000000641 ortholog_one2one 2 retrogenes
retro_rnor_1681, retro_rnor_994,
Sarcophilus harrisii ENSSHAG00000004744 ortholog_one2one 1 retrogene
retro_shar_427,
Ictidomys tridecemlineatus ENSSTOG00000011341 ortholog_one2many 1 retrogene
retro_itri_183,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_194 94.86 74.56
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2. retro_ptro_1780 90.24 100.00
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3. retro_ptro_2715 94.46 100.00
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Download FASTA sequences of all ENSPTRG00000002539 retrocopies