Parental gene:

EIF3F, ENSPVAG00000015764

Aliases:None
Description:eukaryotic translation initiation factor 3, subunit F [Source:HGNC Symbol;Acc:3275]
Organism:Megabat (Pteropus vampyrus)
Coordinates:GeneScaffold_3005:28740..35435(+)


>ENSPVAG00000015764
ATGGCCACACCGGCGGTACCGGCGAGTGCTCCTCCCGCCACTCCAGCCCCAACCCCGGCTACAGCTCCAGCCTCAGCCCC
AGCGCCAGCGCCGGCTCCGGCTCCAGCGCCGGTTCCGGCTCCAACTCCAGCCCCATCCTCATCCCCAGATCCCGCGGCAG
CGGCGGCTACGACCGCGGCTCCGGGCCAGACCCCGGCCTCAGCGCCAGCCCCAGCGCAGACCCCGGCGCAGTCGCTGGCT
GGGCCAGCTCTACCAGGTCCCTTCCCCGGCGGCCGTGTGGTCCGGCTGCACCCGGTCATTTTGGCCTCCATAGTGGACAG
CTACGAGCGACGCAACGAGGGCGCTGCCAGAGTTATCGGGACCTTGCTGGGAACTGTTGACAAGCACTCAGTGGAAGTCA
CCAATTGCTTTTCAGTACCACACAATGAGTCAGAAGATGAGGTTGCTGTTGACATGGAATTTGCTAAGAACATGTATGAG
TTGCACAAGAAAGTCTCTCCAAATGAGCTTATCCTGGGCTGGTACGCTACAGGCCATGACATCACAGAGCACTCTGTGCT
GATCCATGAGTACTACAGCCGAGAAGCCCCCAACCCCATTCACCTCACTGTGGACACGAGCCTCCAGAACGGCCGCATGA
GCATCAAGGCCTATGTTAGCACTTTAATGGGTGTCCCTGGGAGGACCATGGGGGTGATGTTCACACCTCTGACAGTGAAA
TATGCGTATTATGACACTGAACGCATTGGAGTTGACCTGATCATGAAGACCTGTTTTAGCCCCAACCGGGTGATCGGACT
CTCAAGTGACTTGCAGCAAGTGGCAGGGTCATCGGCTCGCATCCAGGATGCCCTAAGCACAGTGTTGCAGTACGCAGAAG
ATGTACTGTCTGGAAAGGTGTCAGCTGACAATACTGTGGGTCGCTTCTTGATGAGTCTGGTTAATCAAGTACCCAAGATA
GTTCCTGATGACTTTGAGACCATGCTCAACAGCAATATCAACGACCTGCTGATGGTGACCTACCTGGCCAATCTCACACA
GTCACAGATTGCCCTCAACGAGAAACTTGTAAACCTGTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000004861 ortholog_one2one 1 retrogene
retro_btau_527,
Callithrix jacchus ENSCJAG00000011903 possible_ortholog 1 retrogene
retro_cjac_1416,
Echinops telfairi ENSETEG00000002717 possible_ortholog 2 retrogenes
retro_etel_1583, retro_etel_35,
Gorilla gorilla ENSGGOG00000011702 possible_ortholog 5 retrogenes
retro_ggor_1566, retro_ggor_1567, retro_ggor_1568, retro_ggor_1589, retro_ggor_1590,
Myotis lucifugus ENSMLUG00000000825 ortholog_one2one 1 retrogene
retro_mluc_2356,
Oryctolagus cuniculus ENSOCUG00000004225 ortholog_one2one 1 retrogene
retro_ocun_1488,
Otolemur garnettii ENSOGAG00000003220 ortholog_one2many 3 retrogenes
retro_ogar_3041, retro_ogar_859, retro_ogar_863,
Pongo abelii ENSPPYG00000003512 possible_ortholog 1 retrogene
retro_pabe_175,
Pteropus vampyrus ENSPVAG00000005186 within_species_paralog 1 retrogene
retro_pvam_690,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_371 69.77 71.03
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Download FASTA sequences of all ENSPVAG00000015764 retrocopies