Parental gene:

GPS2, ENSPTRG00000023046

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:17:7372844..7376048(-)


>ENSPTRG00000023046
ATGCCCGCACTCCTGGAGCGCCCCAAGCTTTCCAACGCCATGGCCAGGGCGCTGCACCGGCACATTATGATGGAGCGGGA
GCGCAAGCGGCAGGAGGAAGAAGAGGTGGATAAGATGATGGAACAGAAGATGAAGGAAGAACAGGAGAGAAGAAAGAAAA
AGGAGATGGAAGAGAGAATGTCACTAGAGGAGACCAAGGAACAAATTCTGAAGTTGGAGGAGAAGCTTTTGGCCCTACAG
GAAGAGAAGCACCAGCTTTTCCTGCAGCTCAAGAAAGTTTTACATGAGGAAGAAAAACGGAGGCGAAAGGAACAGAGTGA
CCTGACCACCCTGACATCAGCTGCATACCAGCAGAGCCTGACTGTTCACACAGGAACTCATCTCCTCAGCATGCAGGGGA
GCCCTGGAGGACACAATCGCCCAGGCACCCTCATGGCAGCTGACAGAGCCAAACAAATGTTTGGACCCCAAGTGCTTACG
ACCCGGCACTACGTGGGCTCAGCAGCTGCTTTTGCAGGGACACCAGAGCATGGACAATTCCAAGGCAGTCCTGGTGGTGC
CTATGGGACTGCTCAGCCCCCACCTCACTATGGGCCCACACAGCCAGCTTATAGTCCTAGTCAGCAGCTCAGAGCTCCTT
CGGCGTTCCCTGCAGTGCAGTACCTATCTCAGCCACAGCCACAGCCCTATGCTGTGCATGGCCACTTTCAGCCCACTCAG
ACAGGTTTCCTCCAGCCTGGTGGTGCCCTGTCCTTGCAAAAGCAGATGGAACATGCTAACCAGCAGACTGGCTTCTCCGA
CTCATCCTCTCTGCGCCCCATGCACCCCCAGGCTCTGCATCCAGCCCCTGGACTCCTTGCTTCCCCCCAGCTCCCTGTGC
AGATGCAGCCAGCAGGAAAGTCGGGCTTTGCAGCTACCAGCCAACCTGGCCCTCGGCTCCCCTTCATCCAACACAGCCAG
AACCCGCGATTCTACCACAAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 45 .13 RPM
SRP007412_cerebellum 44 .31 RPM
SRP007412_heart 29 .09 RPM
SRP007412_kidney 68 .70 RPM
SRP007412_liver 45 .96 RPM
SRP007412_testis 224 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016576 ortholog_one2one 2 retrogenes
retro_amel_1236, retro_amel_362,
Equus caballus ENSECAG00000010635 ortholog_one2one 2 retrogenes
retro_ecab_124, retro_ecab_480,
Homo sapiens ENSG00000132522 ortholog_one2one 2 retrogenes
retro_hsap_2738, retro_hsap_4222,
Gorilla gorilla ENSGGOG00000001672 ortholog_one2one 1 retrogene
retro_ggor_1907,
Macropus eugenii ENSMEUG00000010645 ortholog_one2one 2 retrogenes
retro_meug_1327, retro_meug_182,
Myotis lucifugus ENSMLUG00000026169 ortholog_one2one 1 retrogene
retro_mluc_1045,
Mus musculus ENSMUSG00000023170 ortholog_one2one 1 retrogene
retro_mmus_1476,
Nomascus leucogenys ENSNLEG00000009364 ortholog_one2one 2 retrogenes
retro_nleu_2477, retro_nleu_600,
Pteropus vampyrus ENSPVAG00000005052 ortholog_one2one 1 retrogene
retro_pvam_35,
Sus scrofa ENSSSCG00000017940 ortholog_one2one 1 retrogene
retro_sscr_742,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1852 65.10 56.27
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Download FASTA sequences of all ENSPTRG00000023046 retrocopies