Parental gene:

ENSPTRG00000022224

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:X:120060454..120066078(-)


>ENSPTRG00000022224
CCTGAAGGCATTGAACGACAGTACCGGAAGAAATGTGCAAAGTGTGGACTGCCGCTCTTCTACCAATCCCAGCCAAAGAA
TGCTCCTGTTACCTTCATTGTGGATGGAGCAGTAGTCAAGTTTGGCCAGGGCTTTGGGAAAACGAACATATATACTCAGA
AACAAGAGCCTCCTAAGAAGGTGATGATGACCAAACGGACCAAAGACATGGGCAAGTTCAGTTCTGTCACCGTGTCTACC
ATTGATGAAGAGGAAGAGGAGATTGAGGCTGCTGAATTGGAAGCCAAGAAAGCGAAAATGAAGGGGACCTTGATTGACAA
CCAGTTCAAATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 2 .29 RPM
SRP007412_cerebellum 2 .62 RPM
SRP007412_heart 1 .75 RPM
SRP007412_kidney 3 .50 RPM
SRP007412_liver 1 .83 RPM
SRP007412_testis 1 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000018610 possible_ortholog 1 retrogene
retro_hsap_4044,
Gorilla gorilla ENSGGOG00000013324 possible_ortholog 1 retrogene
retro_ggor_2711,
Latimeria chalumnae ENSLACG00000012468 ortholog_many2many 1 retrogene
retro_lcha_59,
Myotis lucifugus ENSMLUG00000015751 possible_ortholog 1 retrogene
retro_mluc_72,
Macaca mulatta ENSMMUG00000022665 possible_ortholog 1 retrogene
retro_mmul_2333,
Mus musculus ENSMUSG00000006423 possible_ortholog 1 retrogene
retro_mmus_1715,
Nomascus leucogenys ENSNLEG00000014862 possible_ortholog 1 retrogene
retro_nleu_2057,
Otolemur garnettii ENSOGAG00000012474 possible_ortholog 1 retrogene
retro_ogar_145,
Pongo abelii ENSPPYG00000020670 possible_ortholog 1 retrogene
retro_pabe_177,
Sorex araneus ENSSARG00000003163 possible_ortholog 1 retrogene
retro_sara_5,
Sarcophilus harrisii ENSSHAG00000006319 ortholog_many2many 1 retrogene
retro_shar_16,
Ictidomys tridecemlineatus ENSSTOG00000011579 possible_ortholog 1 retrogene
retro_itri_103,
Tarsius syrichta ENSTSYG00000008043 possible_ortholog 1 retrogene
retro_tsyr_634,
Tursiops truncatus ENSTTRG00000013101 possible_ortholog 2 retrogenes
retro_ttru_231, retro_ttru_77,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_104 94.62 84.55
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Download FASTA sequences of all ENSPTRG00000022224 retrocopies