Parental gene:

MEST, ENSPTRG00000019698

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:7:131976839..131991048(+)


>ENSPTRG00000019698
ATGGTGCGCCGAGATCGCCTCCGCAGGATGAGGGAGTGGTGGGTCCAGGTGGGGCTGCTGGCCGTGCCCCTGCTTGCTGC
ATACCTGCACATCCCACCCCCTCAGCTCTCCCCTGCCCTTCACTCATGGAAGTCTTCAGGCAAGTTTTTCACTTACAAGG
GACTGCGTATCTTCTACCAAGACTCTGTGGGTGTGGTTGGAAGTCCAGAGATAGTTGTGCTTTTACACGGTTTTCCAACA
TCCAGCTACGACTGGTACAAGATTTGGGAAGGTCTGACCTTGAGGTTTCATCGGGTGATTGCCCTTGATTTCTTAGGCTT
TGGCTTCAGTGACAAACCGAGACCACATCACTATTCCATATTTGAGCAGGCCAGCATCGTGGAAGCGCTTTTGCGGCATC
TGGGGCTCCAGAACCGCAGGATCAACCTTCTTTCTCATGACTATGGAGATATTGTTGCTCAGGAGCTTCTCTACAGGTAC
AAGCAGAATCGATCTGGTCGGCTTACCATAAAGAGTCTCTGTCTGTCAAATGGAGGTATCTTTCCTGAGACTCACCGTCC
ACTCCTTCTCCAAAAGCTACTCAAAGATGGAGGTGTGCTGTCACCCATCCTCACACGACTGATGAACTTCTTTGTATTCT
CTCGAGGTCTCACCCCAGTCTTTGGGCCGTATACTCGGCCCTCTGAGAGTGAGCTGTGGGACATGTGGGCAGGGATCCGC
AACAATGACGGGAACTTAGTCATTGACAGTCTCTTACAGTACATCAATCAGAGGAAGAAGTTCAGAAGGCGCTGGGTGGG
AGCTCTTGCCTCTGTAACTATCCCCATTCATTTTATCTATGGGCCATTGGATCCTGTAAATCCCTATCCAGAGTTTTTGG
AGCTGTACAGGAAAACGCTGCCGCGGTCCACAGTGTCGATTCTGGATGACCACATTAGCCACTATCCACAGCTAGAGGAT
CCCATGGGCTTCTTGAATGCATATATGGGCTTCATCAACTCCTTCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 19 .11 RPM
SRP007412_cerebellum 6 .74 RPM
SRP007412_heart 2 .42 RPM
SRP007412_kidney 23 .88 RPM
SRP007412_liver 12 .05 RPM
SRP007412_testis 28 .56 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005659 ortholog_one2one 2 retrogenes
retro_amel_1177, retro_amel_1874,
Callithrix jacchus ENSCJAG00000010760 possible_ortholog 2 retrogenes
retro_cjac_1563, retro_cjac_3931,
Felis catus ENSFCAG00000022984 ortholog_one2one 5 retrogenes
retro_fcat_1067, retro_fcat_1645, retro_fcat_1693, retro_fcat_2004, retro_fcat_326,
Loxodonta africana ENSLAFG00000006066 ortholog_one2one 3 retrogenes
retro_lafr_578, retro_lafr_584, retro_lafr_748,
Macropus eugenii ENSMEUG00000008227 ortholog_one2one 1 retrogene
retro_meug_885,
Microcebus murinus ENSMICG00000006129 ortholog_one2one 1 retrogene
retro_mmur_1091,
Macaca mulatta ENSMMUG00000009499 ortholog_one2many 2 retrogenes
retro_mmul_1936, retro_mmul_94,
Nomascus leucogenys ENSNLEG00000012841 ortholog_one2one 3 retrogenes
retro_nleu_1065, retro_nleu_515, retro_nleu_790,
Otolemur garnettii ENSOGAG00000009224 ortholog_one2one 1 retrogene
retro_ogar_3464,
Pongo abelii ENSPPYG00000018006 ortholog_one2one 4 retrogenes
retro_pabe_2337, retro_pabe_2510, retro_pabe_2511, retro_pabe_866,
Sorex araneus ENSSARG00000000502 ortholog_one2one 1 retrogene
retro_sara_352,
Ictidomys tridecemlineatus ENSSTOG00000020977 ortholog_one2one 2 retrogenes
retro_itri_1210, retro_itri_1610,
Tursiops truncatus ENSTTRG00000004934 ortholog_one2one 4 retrogenes
retro_ttru_1026, retro_ttru_1115, retro_ttru_1133, retro_ttru_1907,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1769 80.84 63.88
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2. retro_ptro_2045 82.78 89.55
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Download FASTA sequences of all ENSPTRG00000019698 retrocopies